Phage RBP Database

Genbank accession

CAB4128881.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MALNPDAPKYPETDTDLLQNGAEAILTVPLPPYSSPDYQVPNDQVQPEVDIDLLPGVPGQRGPTGPTGPTGAASTIVGPTGATGATGPTGPTGAASTVIGPTGPTGAAGAAGATGPRGATGEAGATGPRGNTGPTGPIGETGPRGLTGATGPEGIEGPTGATGPMGETGPQGYTGNTGARGAVGETGPIGETGPQGEIGPTGPHGATGVQGPTGPMGETGPQGETGPIGETGPTGPMGDTGPTGADSTVPGPTGPMGETGPTGAGGGMGETGPQGAVGPQGAQGIQGVQGIQGATGPQGATGAVGATGATGDTGPTGPTGEVGPTGSTGETGPMGDTGPQGPTGPQGELGPTGPQGVEGLQGVPGDTGPSGPQGDTGPTGPQGETGPTGATGETGPQGATGPQGADGQFGGAVFTYNYLTNTVDSNPGSTNLKFNNTLITADKLFINVNDIHSTNIQAYLETIDDSTSTIKGHFKVEEVGNSANYTYYSINGYHTLSGSYYKVPIVYLTGSVTSWADGTDVNITFVRTGDAGDPGLGGTIANWGSFWDTTTQTAAAINTAYAMTLNSYDPLNIGVTVVSGSHITVANAGTYNIQFSAQMDKISNGTDKVNIWLRKNGSDVADSDTEMTFTKDEKTIAAWNFVVAANAGDYYQLMWSTADTGIRIFAQAASTSPVRPAIPSVILTVTQVTYTQVGPTGPTGNTGPTGPTGETGPAGATGATGATGATGPQGDLGPTGPQGVEGLQGVPGDTGPSGPQGETGPTGPIGETGPMGETGPQGATGPQGETGPIGETGPQGPTGATGADGPTGPTGAQGPTGAQGIQGVIGNTGPTGPTGADSTVPGPTGPTGADSTVPGPTGSTGPTGPTGPTGTAGTNGTNGTNGTNGAAATIAVGTVTSTGPTGTASVTNSGTSSAAVFDFVLKQGVKGDTGTAGVGIYSIIRTSGTGAAGTTDVYTITYTDSSTNTFNVVNGANGTAGVDGKTVRSGSSTPSSGLGVDGDFYIKTSTNEIYGPKTSGSWGSPTSLIGPTGPTGITVANAPLSLSGPTGASLFIADATTSVKGAVQLSDSTSTTSSTTAATSTAVKAAYDKISNIDSLSDVTITTAADWQLLRYNNSTSQWVNDSIDGGSA

Physico‐chemical properties

protein length:	1129 AA
molecular weight:	108906,28320 Da
isoelectric point:	4,05003
aromaticity:	0,04606
hydropathy:	-0,36050

Domain architecture

CAB4128881.1

1 1129 aa

STR 100–158 · STR 190–245 · STR 350–408 · STR 694–751 · STR 1056–1089 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR050149
Unmapped

IPR050149 IPR008160 IPR005068

IPR008160
STR

IPR008160 IPR008160 IPR008160

CAB4128881.1

11129 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0620
STR

DC_0620 DC_2298 DC_0529 DC_1479 DC_1854

DC_1431
STR

DC_1431 DC_0341 DC_1341

CAB4128881.1

11129 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR050149	Unmapped	-	50	421	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	100	158	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	190	245	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	350	408	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	694	751	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR005068	STR	DC_0738	1056	1089	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits

Proteins with similar domain architecture

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch

Host No host information

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)