Protein

View in Explore
Genbank accession
XDJ00163.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSGFDPFYTYPDKTVGNYLSQVPGSDNTGMNNSLDSFNAAILKLALKGGGVLHPEPGIYKISGGSVLLPSYVTLDLRGCELRGDGKGTNTLIASGWVENGTLIDITPEYGTGGGDGNGTHFVIQARVFGGKLTNAGIGIRGQRFNYGTTIEGVWFENSLSQGWFTTHSWGLKVTRCLARATCKMLDFVDWTEVSNNDFEGLAYFVSGYVGLIIGTGGYGGSYSCRIISNGFHQMETAIKLEGEIDDLVIESNHYERTVYHVVGDQYTKTNFRIKHNWMKANLAHPDDPSLEPPTKPGVIPMVFQNLKDSDIGPNRFTNDSGSTYSAHIVATGDECYGNRYYVGYKTDVDNDFSKIQMSNANALYVMRGSNNSTISQPSIELRSGSAAYTVEKYKASYNMQLNKIPLCDVYLDGSGNATVTTWFQQSDQLLGAFSFRFVGSSATAVVAGTFCYDTANVTINKISSGGSLPIAIGAAGDGRLTISFAQVPVGASITGWVKQL
Physico‐chemical
properties
protein length:500 AA
molecular weight: 53999,80750 Da
isoelectric point:5,62464
aromaticity:0,11000
hydropathy:-0,18680

Domains

Domains [InterPro]
IPR012334
24–286
IPR012334
IPR011050
26–326
IPR011050
XDJ00163.1
1 500
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT18
[NCBI] 		3229742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ00163.1 [NCBI]
Genbank nucleotide accession
PP926505 [NCBI]
CDS location
range 48852 -> 50354
strand +
CDS
ATGAGTGGGTTTGACCCATTCTATACGTACCCTGATAAAACAGTTGGGAATTATTTGTCACAAGTGCCAGGGTCAGATAATACAGGCATGAATAATTCTTTGGATTCGTTTAATGCAGCCATCTTGAAACTCGCTCTTAAAGGTGGGGGTGTCCTTCACCCAGAGCCGGGAATTTACAAAATATCCGGCGGGTCGGTTTTACTCCCATCATATGTTACTTTGGATCTTCGTGGGTGTGAACTTCGTGGCGATGGGAAAGGGACAAACACACTCATAGCTTCTGGGTGGGTCGAAAATGGGACTCTGATAGATATTACGCCAGAATATGGAACCGGCGGCGGTGATGGCAATGGAACTCACTTCGTTATACAAGCCCGCGTGTTTGGTGGCAAGCTGACCAATGCCGGGATAGGCATCCGAGGCCAACGTTTTAACTACGGCACCACCATAGAGGGTGTATGGTTCGAAAATTCGCTTTCTCAGGGTTGGTTTACAACTCATTCATGGGGGTTAAAAGTAACACGTTGTTTGGCTCGCGCGACTTGTAAGATGCTGGACTTTGTTGATTGGACCGAGGTTTCAAACAATGATTTTGAAGGTCTTGCATATTTCGTTTCTGGTTACGTGGGCCTGATCATTGGAACTGGTGGATACGGGGGTAGTTACAGTTGCCGTATTATATCCAATGGGTTCCACCAAATGGAGACAGCCATAAAACTTGAAGGTGAAATAGACGATTTAGTTATTGAAAGTAACCATTATGAACGTACCGTATACCATGTGGTGGGTGATCAATACACGAAGACTAATTTCCGAATCAAACATAACTGGATGAAAGCAAACCTTGCACACCCAGATGACCCGAGTCTGGAACCACCAACCAAACCTGGTGTTATCCCTATGGTTTTCCAGAACCTGAAAGATTCAGACATCGGGCCAAACAGATTTACGAATGATTCCGGCTCTACTTATTCAGCACACATTGTGGCCACTGGTGATGAATGTTACGGTAACCGCTACTATGTTGGTTACAAAACAGATGTTGATAACGATTTTTCAAAAATCCAGATGTCTAATGCAAACGCGTTGTATGTTATGCGTGGTTCTAACAACTCCACGATTTCCCAACCTAGCATTGAATTACGATCTGGTAGTGCGGCATATACTGTAGAGAAGTACAAAGCTAGCTACAACATGCAACTAAACAAGATTCCACTTTGTGATGTTTATCTAGATGGTTCTGGAAACGCGACCGTCACCACTTGGTTCCAACAGAGCGACCAATTACTTGGAGCCTTCAGTTTCAGGTTTGTTGGTAGTTCAGCAACTGCGGTCGTTGCTGGAACATTCTGCTATGATACAGCGAATGTGACTATCAACAAAATATCCTCAGGTGGGTCGTTACCAATCGCTATTGGTGCTGCCGGAGATGGGAGATTAACCATATCTTTTGCACAAGTCCCGGTCGGCGCAAGCATTACAGGTTGGGTTAAACAATTGTAA

Tertiary structure

PDB ID
e16e2140ba251d294d559158653193a6ee8bc79b56fcf5d39cd6c4e68bae4683
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank