Phage RBP Database

Genbank accession

WJN64920.1 [GenBank]

Protein name

tail tubular protein B

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MEVQGSYGRQLQGVSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILDSLDPNSLIHHYKRGDDAEEYFVILRPGQVPVIFTVNGLPCSVNTQGSAATYLNSSSLPRETTQLMTIGDYTFVLNRTMPVRARGDMTPGLDNKGLVYVAYANFSFTYQILINGNVAAQHKTASSEDVKNEDLVRTDYVAGKLIEDWETKKQNFPGFSMYQDGNVIVVDNNSGAAYSLTTIDGADGQDLVAIRHKVSNLDTLPNRAPAGYKVQVWPTGSKPESRYWLQAEPQDGSKVTWVETIAPGVRLGWDGATMPHVLVRESLNSDGSANFTYRPGEWEDRDVGDDLTNDFPSLLNVASPQPISSMLMVQNRLMLTSGEAVVASRTSRFFDFFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVILFTSDQQFTLPGDKPLTPTSAVIRPVTAFKMTPGVRPVPSGDSILFAFDQGSYSGIREFFTDSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITNNDRSVLYVYDWLYEGTEKVQNAWHKWSFPAGTVLHTVSYSNEKLYLVMSRNNTSGAVAGVYIEVMDMGDELEYGLQDRVRMDRRATSNMHYNAANRTWTSDPLKWLPTDLSSLDAVLLTGWPSYVGGAFQFSYNPSTNTISTNFDLAEGGTVQVVVGETYWYEVEPTPPLIKDSKDRVSYLDTPTVGNIYLNLDMYPDFSVVVTDKETLQERVVYLSNKVAGSLTNVIGYISPHEGTLRVPIRRKSTDISFKVRSKSPSTFQLRDIEWTGSYNPRKRRV

Physico‐chemical properties

protein length:	806 AA
molecular weight:	89869,76640 Da
isoelectric point:	5,37074
aromaticity:	0,10298
hydropathy:	-0,34020

Domain architecture

WJN64920.1

1 806 aa

TTP 3–806

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

WJN64920.1

1806 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	3	806	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WJN64920.1

1 806 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	143	143	0,9951
Central domain	144	360	218	0,1086
C-terminal	361	806	445	0,1421

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Erwinia phage Tapenade [NCBI] · taxon 3056603

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Erwinia amylovora [NCBI] · taxon 552

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WJN64920.1 [NCBI]

Genbank nucleotide accession

OQ818708 [NCBI]

CDS location

range 28723 -> 31143
strand -

CDS

ATGGAAGTACAAGGCTCATACGGGCGTCAGCTACAGGGTGTATCACAACAACCCATCGCGGTCAGGTTGCCAGGGCAGGTCACGTCACAACTTAATGCAGTGCCGAATGTGGTTGATGGCCTTAAAACTCGTATGGGTTCTAAGCACCTGGCCCGTATCCTCGACAGCCTCGACCCAAACTCCCTTATTCATCATTACAAGCGCGGTGACGATGCGGAAGAATATTTTGTCATCCTCAGACCTGGACAGGTTCCCGTTATCTTCACGGTTAACGGCCTACCTTGTAGCGTCAATACCCAAGGATCGGCAGCTACCTATCTGAACTCGTCAAGTCTCCCGCGTGAGACAACCCAGTTAATGACCATTGGTGACTATACCTTTGTGCTTAACCGGACAATGCCAGTGCGTGCGCGTGGTGATATGACACCTGGTCTGGATAACAAAGGCCTGGTATATGTTGCCTACGCAAACTTCAGCTTCACCTACCAAATCCTCATCAATGGGAATGTGGCAGCACAGCATAAGACAGCCTCTTCTGAGGATGTTAAAAATGAAGACCTGGTAAGGACGGATTATGTTGCTGGTAAGCTGATTGAAGATTGGGAAACTAAGAAGCAAAACTTCCCTGGGTTCTCCATGTATCAGGACGGTAACGTTATTGTAGTTGATAACAATAGCGGTGCTGCATATTCACTCACTACCATCGATGGTGCAGACGGGCAGGACTTAGTAGCAATCCGCCACAAGGTATCTAACCTGGACACCTTACCGAACCGCGCACCTGCTGGGTACAAAGTTCAGGTATGGCCTACCGGGAGTAAACCAGAGTCACGCTATTGGTTGCAAGCTGAACCACAGGACGGCTCTAAGGTAACGTGGGTTGAGACTATCGCACCGGGTGTACGCCTGGGCTGGGATGGGGCTACAATGCCTCATGTCCTTGTGCGTGAAAGCCTTAACTCAGATGGCTCTGCTAACTTCACATACAGACCTGGTGAGTGGGAAGACCGGGACGTAGGCGATGACCTGACTAACGATTTCCCGTCCCTGCTTAATGTGGCCTCACCCCAGCCTATTTCTTCCATGCTGATGGTACAGAACCGCTTGATGCTTACATCGGGGGAGGCAGTGGTGGCAAGCCGTACCTCTCGCTTCTTTGACTTCTTCCGATACACTGTACTGGCTACGGTAGATACGGACCCATTTGATGTGTTCGCAGATATCGAGGAAGTGTATAACATCCGGTGGTCAGCACAGATGGATGGTGACGTTATCCTGTTCACATCGGACCAACAGTTCACGCTGCCTGGTGACAAGCCACTTACCCCAACATCCGCAGTAATCCGTCCGGTCACAGCATTCAAAATGACACCAGGCGTAAGGCCTGTACCTTCCGGTGACTCCATCCTGTTTGCATTCGACCAGGGTTCTTACAGTGGCATCCGTGAGTTCTTCACAGACAGCTACTCAGACACTAAGAAGGCGCAGCCAGCAACTAGCCATGTTGATAAATACATCCGTGGCAAGGTGTTAGAGTTGTCTGCTAGCTCTAGCTTTAACAGAGCATTCATCATTACTAACAACGACCGCAGTGTCCTGTATGTATATGACTGGCTCTATGAGGGCACGGAGAAAGTGCAGAATGCCTGGCACAAGTGGTCCTTCCCAGCGGGTACGGTATTGCACACGGTGAGCTATTCAAATGAGAAACTCTACCTTGTAATGTCCCGTAACAACACTAGCGGTGCGGTTGCTGGTGTTTACATTGAGGTGATGGACATGGGCGATGAGTTGGAGTACGGATTGCAGGACCGTGTTCGCATGGACCGCAGGGCAACATCCAACATGCACTATAATGCAGCTAACCGCACGTGGACCTCTGACCCGCTCAAGTGGCTACCTACGGACCTTAGTTCACTTGATGCAGTCTTGCTCACAGGCTGGCCCAGCTATGTTGGTGGTGCTTTCCAGTTCTCCTACAACCCGTCTACTAATACCATCTCTACCAATTTCGATTTGGCTGAAGGTGGCACAGTGCAGGTTGTTGTGGGTGAAACTTACTGGTATGAGGTTGAACCTACACCACCACTGATTAAGGATAGCAAGGACCGTGTATCTTATCTTGATACGCCAACGGTAGGTAACATCTACCTTAACCTGGACATGTACCCAGACTTCTCAGTTGTAGTGACTGACAAGGAGACATTGCAGGAGCGGGTGGTTTACTTGTCGAATAAGGTTGCTGGTTCTTTAACAAACGTCATCGGTTATATCTCACCTCATGAGGGTACGCTACGTGTTCCTATCCGTCGTAAGAGTACCGATATTAGTTTCAAGGTTCGGTCCAAGTCTCCTTCTACTTTCCAGTTGAGGGATATTGAATGGACAGGTTCCTACAACCCACGTAAAAGGAGGGTGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)