Protein

View in Explore
Genbank accession
QHB48149.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTYALDGTKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFTTNTTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNMRQQRQWAGSALNSANASAASAQASEASRQASLAQAQSSAASAGQSSTYATNSQNSASNSQTSRLASEAARDASITARDLSQAWSSKAEDQVVASGLYSSYHYSRKSAASATASQTSATNSANSASFSTTEANRATTQADRAKTEADKLGNMNALGGAIREVNTTGKKVEINTGWEWNSDVIAVDGVRSRSSSSIDFNAQLNGRLGASFTGSLSVGGTTSLQNTTVAGLTVNSGAQFKNGNVQVFATNSSSNSHVWFYGPDGTSRGILYAGTDKAVRMQAGEVVCATFSPDGGTTLNNISAGNVTARATAYTQGGIENNGRVASYRNGVGANASMYANCHFMAQTDDGTAPAYGFHRGGSYALALWLNGNQLHMMDSSGTNREILNNTNLGSWMVSVGEQGVGSYAFCRSGVTATYGVDVAGGNLTYGSTGANGGSVPGTWRSRGWAGGGNHTLFQRIA
Physico‐chemical
properties
protein length:609 AA
molecular weight: 63936,08870 Da
isoelectric point:7,70756
aromaticity:0,07389
hydropathy:-0,37323

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil
QHB48149.1
1 609
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage CHF17
[NCBI] 		2686373 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB48149.1 [NCBI]
Genbank nucleotide accession
MN729600 [NCBI]
CDS location
range 35232 -> 37061
strand +
CDS
ATGGCTACTACACCAAAGACGGTGCGGACCTACGCTCTCGACGGCACCAAGAAAGACTTCACGATCCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTGGTCACCTTGATCGGTGCAACTCGACGTGAGCTGATCCTGAACACCGAGTACCGCTTCACTACCAACACGACCATCACCACGAATAAGGCATGGGGACCGGCTGATAACTTCGACCTGATCGAGATTCGCCGACTGACCTCTGCAACTGAGCGTCTGGTGGACTTCGCTGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCGCAGGTGCAATCGCTGCACATCGCTGAGGAAGCCCGTGACTTGACCGCTGACACAATCGGCGTGAACAACGATGGTGACCTCGATGCCCGTGCCCGTAAGATCGTCAACCTCGCCGATGGCGTGAACGATGGTGATGCCGTAAACATGCGTCAACAGCGGCAATGGGCAGGCTCTGCGTTGAACTCTGCGAACGCCAGTGCTGCCTCTGCGCAAGCCTCTGAGGCGTCCCGTCAGGCTTCCTTGGCGCAGGCCCAATCGAGCGCTGCAAGTGCTGGTCAATCGAGCACCTATGCGACCAACTCTCAGAACTCTGCAAGCAACTCTCAGACTTCCCGTCTGGCCTCTGAGGCTGCCCGTGACGCTTCCATCACCGCCCGTGACTTGTCCCAAGCGTGGTCCTCGAAGGCTGAGGATCAGGTCGTTGCATCTGGCCTCTATTCGTCCTACCACTACAGCCGCAAGTCGGCAGCGAGTGCCACGGCAAGTCAGACCTCTGCGACCAACTCTGCGAACTCTGCGAGTTTCTCCACGACCGAGGCCAACCGGGCAACCACTCAGGCCGACCGTGCGAAGACCGAGGCTGACAAGCTGGGCAACATGAACGCGCTCGGTGGGGCGATCCGTGAAGTAAACACGACTGGCAAGAAGGTAGAGATCAACACCGGCTGGGAGTGGAATTCTGACGTAATTGCGGTAGACGGGGTCCGCTCAAGGAGTTCGTCCTCCATCGACTTCAATGCCCAGCTCAACGGGAGACTTGGCGCTTCATTCACTGGTAGCCTTTCAGTTGGAGGTACTACCAGCCTACAGAACACCACTGTAGCCGGTCTAACAGTGAACTCTGGTGCCCAGTTCAAGAATGGTAACGTGCAGGTATTTGCCACGAACTCATCGTCTAACTCCCATGTCTGGTTCTACGGCCCTGACGGTACTTCCCGAGGAATTCTCTATGCTGGCACAGACAAAGCGGTAAGGATGCAAGCAGGGGAGGTAGTGTGCGCGACCTTCTCTCCAGATGGAGGGACCACACTAAACAACATATCTGCTGGTAATGTTACGGCCCGTGCTACTGCATATACTCAAGGTGGGATTGAGAATAACGGGCGTGTCGCGTCCTACCGCAATGGTGTGGGCGCAAATGCTTCCATGTATGCCAACTGCCACTTCATGGCTCAGACCGACGATGGCACTGCCCCAGCCTATGGGTTCCACCGTGGTGGCTCGTATGCTCTGGCTCTTTGGCTGAACGGAAATCAGTTGCACATGATGGACTCAAGTGGCACTAACCGAGAAATCCTGAACAACACGAACTTAGGCTCTTGGATGGTCAGCGTAGGAGAGCAGGGTGTCGGCTCGTATGCGTTCTGCCGTTCCGGCGTGACTGCTACCTACGGCGTTGACGTTGCTGGTGGAAACCTGACCTACGGCTCGACTGGCGCGAACGGTGGCTCTGTCCCCGGAACTTGGCGTTCCCGTGGCTGGGCTGGCGGTGGTAACCATACCCTGTTCCAGCGTATCGCTTAA

Tertiary structure

PDB ID
fd15a396c0fd63944a407496677ff6a16268f718adca7cd44dfbaefcaf92630d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Bacteriophages against Pseudomonas Syringae pv. Actinidiae with Potential Use as Natural Antimicrobials in Kiwifruit Plants Flores,O., Retamales,J., Nunez,M., Leon,M., Salinas,P., Besoain,X., Yanez,C. and Bastias,R. 2020 — GenBank