Protein

View in Explore
Genbank accession
AGN12302.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,68
TF
Evidence Phold
Probability 1,00
Protein sequence
MADKGFGVKKINLIGASGTPTLTSPNNLNLNAVNVAISTDVSIGGTCTAYEFSGATASWMVGNDGTDNYTFIGSGISTQVNDPELNLYKGQKYIFHNRSSGHPFRIQITPNGSVGGQYNTGVTNNDGSAQTDIIFEVPQDAPDTLYYQCTSHTGMGGKINIVGVASDTDTTLDGKTSGTNVYLGTTAGAANTTSPGNEVGIGYSALMQSTGRDSTGIGAYALQNVNGYYNTAVGSYAGFSTTAGISTASDNSFFGYASGYQNNGDGNSGIGLRTLFRNIGTENTALGMYSLQDNINGSYNVGMGVYAQYANVSGSNNTSAGWAALSSNVSGNFNLVLGSNALRTITSGLSNAAVGSDAGRYLTGGSSYNTLIGNYAVGIGTTGSYVTAVGASALAKNIANFNTATGAYASLQNTTGALNCSFGAYAGENTTTGSWNNAFGYAALNDNITGVSNNVMGYFALGVSTDASYNVAIGYESLKSLKTGDYNTAVGHRTLDLQTSGSYQTALGGFALGMSTTTISNTAIGYGSQLQTIEGNYNTAVGNNSLRENIEGDSNVAVGDNAIGIGTTGSYNVAVGAYALEKIIVTIVLQ
Physico‐chemical
properties
protein length:590 AA
molecular weight: 60301,99170 Da
isoelectric point:4,57079
aromaticity:0,09153
hydropathy:-0,12220

Domains

Domains [InterPro]
IPR008972
74–160
IPR008972 IPR011049
AGN12302.1
1 590
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM5
[NCBI] 		536454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN12302.1 [NCBI]
Genbank nucleotide accession
HQ632825 [NCBI]
CDS location
range 114378 -> 116150
strand -
CDS
ATGGCAGATAAAGGATTTGGCGTAAAGAAAATTAATTTGATTGGGGCATCTGGTACTCCAACACTTACAAGTCCAAATAATCTAAATTTAAACGCAGTAAACGTTGCTATAAGTACTGATGTATCAATCGGTGGAACTTGTACTGCATATGAATTTAGTGGTGCTACTGCTAGTTGGATGGTTGGTAATGATGGAACAGATAATTACACTTTTATAGGATCAGGTATTTCAACTCAAGTAAATGATCCAGAATTAAATCTTTATAAAGGACAAAAATATATTTTTCATAATAGATCTTCAGGGCATCCATTTAGGATTCAAATCACTCCTAATGGGTCTGTAGGTGGACAATATAATACTGGTGTGACCAATAATGATGGTTCCGCACAAACAGATATTATATTTGAAGTTCCACAAGATGCACCTGATACTCTATATTATCAGTGTACATCGCATACTGGAATGGGTGGTAAGATTAATATAGTAGGTGTAGCTTCTGATACTGATACAACTTTAGATGGAAAGACTAGTGGTACAAATGTTTACTTAGGAACTACTGCTGGTGCAGCAAATACAACAAGTCCTGGTAATGAAGTTGGTATTGGTTACAGTGCATTAATGCAATCTACTGGCCGTGATAGTACTGGTATTGGAGCATACGCTTTACAAAATGTTAATGGATATTATAATACTGCAGTTGGATCTTACGCTGGATTTAGTACTACTGCTGGCATTAGCACTGCATCAGATAATAGTTTCTTTGGATATGCTTCTGGGTATCAGAATAATGGAGATGGTAATTCTGGAATTGGTCTTCGTACTCTCTTTAGAAATATTGGAACAGAGAATACTGCATTGGGTATGTATTCTTTACAGGATAATATAAATGGAAGTTATAATGTTGGAATGGGTGTTTATGCACAATACGCTAATGTGAGTGGATCAAACAATACTTCGGCTGGTTGGGCTGCATTATCCTCTAATGTGAGTGGTAATTTTAATTTGGTTTTAGGGTCGAATGCATTAAGAACAATTACCTCTGGACTTTCAAATGCTGCTGTAGGTTCTGATGCAGGAAGGTATTTAACTGGTGGATCTAGTTATAATACATTAATTGGTAATTATGCTGTTGGTATTGGTACTACTGGAAGTTATGTCACTGCCGTTGGAGCAAGTGCATTAGCTAAGAATATAGCAAATTTTAACACAGCAACAGGTGCTTATGCATCGCTACAGAATACAACAGGAGCTTTGAATTGTTCTTTCGGTGCTTATGCAGGAGAAAATACCACGACAGGAAGTTGGAATAATGCGTTTGGATATGCTGCTTTAAATGATAATATAACAGGTGTATCTAATAATGTAATGGGATATTTCGCACTTGGAGTTTCTACTGATGCTAGTTATAATGTTGCAATCGGATATGAGAGTTTAAAATCTCTAAAAACTGGTGATTATAATACTGCTGTAGGACATAGGACACTTGATCTTCAAACTAGTGGAAGTTATCAAACTGCTCTTGGTGGATTTGCATTAGGTATGAGTACTACGACCATATCAAATACTGCTATTGGATATGGTAGTCAACTTCAGACTATAGAAGGTAATTATAATACTGCGGTTGGAAATAATAGTTTACGGGAAAATATTGAGGGTGATAGTAATGTTGCTGTGGGAGATAACGCAATTGGTATTGGAACGACTGGAAGTTATAATGTTGCAGTTGGTGCTTATGCATTAGAAAAAATAATAGTAACTATAGTACTGCAGTAG

Tertiary structure

PDB ID
ba8a842dd47f76e74e7aaea12bd6fe76bbc81e184ae3722276aa5ef429532989
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8413
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM5 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank