Protein

View in Explore
Genbank accession
AUE23153.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MATIKQIQFKRSTASGTKPAVAQLAEGELAINLADRTIFTKDHNNQIIDLGFAKGGTINGDVIQIGNYKQTGQYTLTGNIDASGDITSHGKVWTHALMVRPLDQGASFIIENHSNVSKDLRIIAHSTGELPTDYDRLLFRSINDTNVLDPMSISWSKNSNETVVDVYGKLNSRNLLTANKAVITNNSAIDNVLGDNSIALGDNDTGFKWWADGHYNLVSNGVAVLRLNQSESSFLRTTHFQYSADGWSTTIVPENASLIQVSTEKDDNNIGDGWTHLGLNQGGKYSHYLRGSGTTFIDTLDGLRISTSVSALKGISTEGKGTGDYDSYSLVNWDESPTTSTNHLRKFRPFRTGTIIHELISGTTGDINTTNALSWFHGLGPDNWMASLNADGSFKINGTLETNAAYEAFNIKTRDGAPAYIRGANNNETSWLMGRVKAGSNEFVIRANNLAGQTMVDLVSSPDNKSFAINIDGNIISRFKNDVVTIDGSRWAAIRSHSYGEQWAYDAPVTLDTGSVPGVSDYYPAFSQKSIVANVGFNTKVEFGTLRDSNTWGRGIIRVGTFGYQSDANRQGIFTFTLDGDFQSQRYVIAPHFLTGVSSSAYPDRAGITIGDNDTGIYWGGDGIVAHFANSIQVAVLDSTGFRTEGGRSLVSNGDLNQANDAHSTYVRDIYIRSDIRVKSELRKFESPSETLKKMNGYLYLQKKGFKEDGSINWEQSSGLIAQEVQAVLPELISVDKDNPEGLLRLNYNGIIALNTATINEHTDEISELKARIQKLEEIISALI
Physico‐chemical
properties
protein length:784 AA
molecular weight: 85685,93300 Da
isoelectric point:5,45407
aromaticity:0,08801
hydropathy:-0,35842

Domains

Domains [InterPro]
IPR030392
674–732
IPR030392 Coil
IPR030392
674–773
IPR030392
AUE23153.1
1 784
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CF1 ERZ-2017
[NCBI] 		2267236 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUE23153.1 [NCBI]
Genbank nucleotide accession
MG250484 [NCBI]
CDS location
range 158751 -> 161105
strand +
CDS
ATGGCTACTATTAAACAAATTCAATTCAAACGATCTACTGCTTCAGGTACAAAGCCGGCAGTAGCTCAGCTAGCAGAAGGCGAATTAGCTATTAATTTAGCTGATCGCACAATTTTCACTAAAGACCATAACAACCAAATTATTGATCTTGGCTTTGCTAAGGGCGGTACAATAAACGGTGATGTTATTCAAATTGGCAACTATAAGCAAACTGGTCAGTATACCTTAACCGGGAACATTGATGCTTCTGGCGATATTACATCTCATGGAAAGGTGTGGACTCACGCACTTATGGTTCGTCCTTTAGATCAAGGCGCATCATTCATTATAGAAAACCATTCTAATGTCTCCAAAGATCTTAGAATAATTGCGCATTCTACTGGCGAACTTCCTACCGATTATGACCGATTACTGTTTAGAAGCATAAATGATACAAATGTTTTAGACCCAATGTCTATTTCATGGTCAAAGAACAGCAATGAAACAGTCGTTGACGTTTATGGCAAACTTAATTCGCGTAATTTGCTTACAGCTAATAAAGCTGTAATAACAAACAATTCTGCTATAGATAATGTGCTTGGTGATAACTCCATCGCATTAGGTGACAATGACACCGGATTTAAATGGTGGGCTGATGGACATTATAACTTAGTTTCAAACGGTGTAGCTGTTCTTCGTTTAAACCAAAGCGAATCATCATTTCTACGTACGACGCATTTCCAATATTCTGCTGATGGGTGGTCAACTACAATTGTCCCTGAAAACGCATCATTAATACAAGTTTCTACAGAAAAAGATGATAATAATATTGGAGATGGATGGACACATTTAGGTCTTAATCAAGGTGGAAAATATTCGCATTATCTTCGTGGATCAGGTACAACATTTATTGATACTCTCGACGGGCTGCGTATTTCCACTTCAGTATCTGCATTAAAAGGCATTAGCACTGAAGGTAAGGGTACTGGGGACTATGATTCATACTCTTTAGTGAATTGGGATGAATCTCCGACAACGAGTACAAACCATTTACGTAAATTCCGTCCGTTCCGCACCGGGACTATTATTCATGAATTAATTTCTGGCACTACTGGCGATATTAATACCACTAATGCTTTAAGTTGGTTTCATGGTTTAGGACCTGACAATTGGATGGCTTCTTTGAATGCTGACGGAAGCTTTAAGATAAATGGTACTCTAGAAACTAATGCAGCTTATGAAGCGTTCAATATTAAAACTAGAGATGGTGCTCCTGCTTATATTCGCGGTGCCAATAATAACGAAACATCTTGGCTGATGGGGCGAGTTAAAGCTGGTAGTAATGAGTTTGTAATACGAGCAAATAACTTAGCCGGGCAGACTATGGTTGATCTAGTTTCATCACCCGATAATAAGAGCTTTGCTATTAATATTGACGGTAATATAATTTCTAGATTCAAAAACGATGTGGTTACTATTGATGGTTCTCGTTGGGCTGCAATAAGGTCTCATTCATACGGTGAGCAATGGGCTTATGACGCTCCAGTAACTCTTGATACGGGAAGTGTTCCGGGAGTTTCAGATTACTATCCTGCATTTTCACAAAAGTCAATTGTGGCTAATGTCGGCTTTAATACTAAGGTTGAATTTGGTACTCTTAGAGATAGTAATACATGGGGCCGAGGTATTATTCGTGTTGGTACATTTGGATATCAATCGGATGCTAATAGACAAGGTATTTTTACTTTTACATTGGATGGAGATTTTCAATCTCAACGATATGTTATTGCACCTCATTTCTTGACCGGAGTATCTTCATCAGCTTATCCTGATAGAGCAGGTATAACTATCGGGGATAACGACACTGGAATTTACTGGGGTGGAGACGGGATTGTCGCTCACTTTGCAAACTCTATTCAAGTTGCTGTATTAGATAGCACTGGATTCCGTACCGAAGGTGGACGTAGTTTAGTTTCAAATGGTGACTTAAACCAAGCAAATGATGCTCACTCTACTTATGTTCGCGATATCTATATTCGTTCAGATATTCGTGTTAAGAGTGAACTTCGTAAATTTGAATCTCCTTCTGAAACTCTTAAGAAGATGAACGGATATTTGTATCTTCAGAAGAAAGGTTTCAAAGAAGATGGTTCTATTAATTGGGAACAGTCATCTGGTTTAATTGCTCAGGAAGTTCAAGCTGTATTACCTGAATTGATTTCAGTCGATAAAGATAACCCAGAAGGATTACTTCGTCTGAACTACAACGGTATTATTGCGCTGAACACTGCAACAATTAACGAACATACTGATGAGATTTCTGAATTAAAAGCTCGTATTCAGAAGCTTGAAGAAATCATTTCTGCATTAATTTAA

Tertiary structure

PDB ID
ce90e8e4eb019b8beebe291707a46ef6654a4bf05206f418aba12686c9559bb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank