Protein

View in Explore
Genbank accession
XDJ00160.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MGYLQMTRNVESIFGAVVTAPHQIPYTYTATGGETFISLPFYPVTGFITINGGVQVPVDNYEIDGNTVNLGRALEADDVVYCLFDKILSPEDYENGIRIYKFQAVGNETTFTPDFTTYGVQTLYIDGKFQVPGVDYNYNSATGVVSFLNGSPTAGVWVVAEMSIKQNYLALSSDSGASLVGTSSGNTVQEVLNSHSGSFQTGVKLLSSNDLIVDQSVIPNQLYRWDGAFPKTVAAGSSPASTGGVGNGSWVSVGDATLRGELNNEGVINFSHADTYGNDSVGAHLQNVVYPTDAPFNAATDGTTDTTVAIKSAIAHCISKGKKLVLNHLFMITDTLVISDGLHVECLTSDSGVKSDVPAGKFAVKITGANSGWFGGKILGKNLPESTTVRQDGVLFDENAEYCFITGTEVTGFFAKGLHTSDADGVGYGIYDKGYGTLISKCYANSKFCVALGGTEGRVLKNRITNNYLTSGEAKPWSWASNYWDGIVSENAHRYVIAFNDVSACGQSGIYFGGNGGYSTDNIIVNNTVYACWNRGIDMGLFSEKSATNDVLRNIIKGNNTYNNRENNIWLAGVSNCSVVGNTSWFDTNYDVIFAGYPGGHICISLASGANGEACVGNTIDSNTCIDPRGNAGITVPTGATGNVFGSGNNLSQAGAIYIASPDLITSNRFELAVTGSFTPVLLPASGSITLSSSSTGVFRATGNRIDFSVTVNVSSISSPSGNLNIAYLPGMSGKTSSTSMFIIDYWNDLTLSSGVIPLASLNLENQDQITVYRTDGGRVLYDFSSLMKSTSSFILKGFVDFN
Physico‐chemical
properties
protein length:803 AA
molecular weight: 85159,68430 Da
isoelectric point:4,74983
aromaticity:0,10336
hydropathy:-0,02229

Domains

View on InterPro
Domain architecture
XDJ00160.1
1 803 aa
ATT 193–264 · STR 292–610 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XDJ00160.1
1 803 aa
Domain Start End Length (AA) Confidence
N-terminal 1 303 303 0,9943
Central domain 304 667 365 0,9920
C-terminal 668 803 135 0,9885
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage PMBT18 [NCBI] · taxon 3229742
Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
XDJ00160.1 [NCBI]
Genbank nucleotide accession
PP926505.1 [NCBI]
CDS location
range 45878 -> 48289
strand +
CDS
ATGGGGTATCTTCAAATGACCAGAAACGTCGAGAGCATCTTTGGAGCGGTTGTAACAGCCCCGCACCAGATTCCATACACTTATACCGCAACGGGCGGAGAGACGTTTATCTCCCTCCCGTTCTATCCTGTTACGGGCTTCATCACCATCAACGGCGGCGTCCAGGTTCCTGTTGACAACTATGAAATCGATGGTAACACTGTCAACCTCGGTCGAGCTCTAGAGGCTGATGATGTAGTGTACTGTCTGTTTGACAAGATCCTGTCCCCAGAAGATTATGAAAACGGGATTCGAATCTACAAGTTCCAGGCCGTTGGCAACGAAACAACGTTCACTCCCGACTTCACCACATACGGTGTACAGACCCTGTATATCGATGGTAAGTTCCAGGTTCCTGGGGTTGACTACAATTACAACAGCGCGACTGGTGTAGTGTCATTCCTGAATGGATCTCCGACTGCTGGTGTTTGGGTTGTGGCTGAGATGTCCATTAAACAGAATTACCTGGCGCTCTCTTCCGATAGTGGAGCCAGCTTGGTGGGGACTTCTTCAGGTAACACCGTTCAAGAAGTTCTTAATTCACATTCTGGCTCTTTCCAGACTGGGGTAAAACTCCTTAGTTCTAATGACTTAATCGTGGATCAGTCTGTTATCCCTAACCAACTTTATCGTTGGGATGGTGCATTTCCTAAAACTGTAGCTGCTGGCTCATCACCCGCATCAACTGGCGGCGTTGGCAATGGTTCTTGGGTTAGTGTTGGTGATGCGACATTAAGAGGTGAGTTAAATAATGAAGGGGTAATCAATTTCTCCCATGCTGATACGTATGGTAATGACAGTGTAGGAGCGCATCTTCAAAATGTCGTATACCCAACAGACGCCCCTTTCAATGCCGCTACAGATGGTACTACAGACACAACAGTAGCTATTAAAAGTGCAATAGCGCACTGTATATCAAAGGGTAAAAAATTAGTATTAAATCATTTGTTCATGATTACAGATACTCTGGTAATCAGTGATGGGTTGCATGTTGAGTGTCTTACTAGTGACTCAGGTGTTAAGTCTGATGTACCAGCAGGTAAATTTGCAGTAAAAATAACGGGGGCCAATTCTGGTTGGTTTGGGGGTAAAATCCTGGGTAAAAACTTACCAGAATCTACAACAGTAAGGCAGGATGGCGTACTCTTTGATGAGAATGCTGAATACTGCTTTATTACTGGTACAGAGGTTACTGGCTTCTTTGCAAAAGGTTTGCATACCTCAGATGCTGATGGTGTAGGCTATGGTATTTACGATAAAGGGTATGGTACTCTCATCTCTAAATGTTATGCAAACTCAAAGTTCTGTGTAGCTCTGGGTGGTACTGAGGGTCGCGTACTTAAGAACCGTATAACCAATAACTACCTTACATCCGGGGAGGCTAAACCATGGAGCTGGGCTAGCAACTATTGGGATGGGATAGTATCCGAGAATGCTCACAGATATGTCATCGCTTTTAATGATGTATCAGCCTGTGGACAGAGTGGAATTTACTTTGGTGGGAATGGTGGTTATTCAACAGATAACATCATCGTAAATAACACTGTTTACGCCTGCTGGAACCGTGGTATTGATATGGGTTTGTTTTCTGAAAAATCGGCAACAAATGACGTACTCAGAAATATCATCAAGGGTAACAATACCTATAACAACCGAGAAAATAATATCTGGCTTGCAGGTGTTAGTAACTGCTCAGTAGTTGGTAATACATCGTGGTTTGACACCAATTATGATGTAATTTTTGCAGGTTATCCAGGCGGTCATATTTGTATTAGTCTAGCTTCTGGTGCAAATGGGGAAGCTTGTGTAGGGAACACAATCGACTCTAATACTTGTATTGACCCTAGAGGTAATGCAGGTATAACAGTACCTACTGGGGCAACTGGTAATGTTTTTGGATCAGGTAATAATCTATCTCAAGCTGGGGCTATTTATATAGCTTCACCTGACTTGATTACGTCTAACAGATTTGAACTGGCAGTCACTGGTTCGTTCACACCAGTCCTGCTTCCTGCAAGCGGAAGTATAACCCTGTCGTCATCAAGTACAGGAGTCTTTAGGGCAACCGGCAATAGAATAGATTTTTCCGTAACAGTAAATGTATCTTCAATATCATCGCCAAGTGGGAATTTAAATATCGCCTATCTTCCAGGAATGAGTGGGAAAACAAGCTCAACATCAATGTTTATTATTGACTATTGGAATGATTTAACGTTATCAAGTGGTGTAATTCCATTGGCATCATTAAATTTAGAAAATCAAGATCAAATAACAGTCTACCGAACTGATGGGGGAAGGGTTCTCTATGACTTTTCTTCATTGATGAAATCAACATCATCGTTTATATTAAAAGGTTTTGTTGATTTTAACTAA

Genome Context

Tertiary structure

XDJ00160.1
ESMFold structure
Source ESMFold
pLDDT 79.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank