Protein

View in Explore
Genbank accession
XDJ00160.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MGYLQMTRNVESIFGAVVTAPHQIPYTYTATGGETFISLPFYPVTGFITINGGVQVPVDNYEIDGNTVNLGRALEADDVVYCLFDKILSPEDYENGIRIYKFQAVGNETTFTPDFTTYGVQTLYIDGKFQVPGVDYNYNSATGVVSFLNGSPTAGVWVVAEMSIKQNYLALSSDSGASLVGTSSGNTVQEVLNSHSGSFQTGVKLLSSNDLIVDQSVIPNQLYRWDGAFPKTVAAGSSPASTGGVGNGSWVSVGDATLRGELNNEGVINFSHADTYGNDSVGAHLQNVVYPTDAPFNAATDGTTDTTVAIKSAIAHCISKGKKLVLNHLFMITDTLVISDGLHVECLTSDSGVKSDVPAGKFAVKITGANSGWFGGKILGKNLPESTTVRQDGVLFDENAEYCFITGTEVTGFFAKGLHTSDADGVGYGIYDKGYGTLISKCYANSKFCVALGGTEGRVLKNRITNNYLTSGEAKPWSWASNYWDGIVSENAHRYVIAFNDVSACGQSGIYFGGNGGYSTDNIIVNNTVYACWNRGIDMGLFSEKSATNDVLRNIIKGNNTYNNRENNIWLAGVSNCSVVGNTSWFDTNYDVIFAGYPGGHICISLASGANGEACVGNTIDSNTCIDPRGNAGITVPTGATGNVFGSGNNLSQAGAIYIASPDLITSNRFELAVTGSFTPVLLPASGSITLSSSSTGVFRATGNRIDFSVTVNVSSISSPSGNLNIAYLPGMSGKTSSTSMFIIDYWNDLTLSSGVIPLASLNLENQDQITVYRTDGGRVLYDFSSLMKSTSSFILKGFVDFN
Physico‐chemical
properties
protein length:803 AA
molecular weight: 85159,68430 Da
isoelectric point:4,74983
aromaticity:0,10336
hydropathy:-0,02229

Domains

Domains [InterPro]
IPR040775
190–255
IPR040775 IPR012334 IPR006626
G3DSA:2.10.10.80
193–264
G3DSA:2.10.10.80 IPR011050
IPR006626
400–434
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
413–583
IPR039448
XDJ00160.1
1 803
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT18
[NCBI] 		3229742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ00160.1 [NCBI]
Genbank nucleotide accession
PP926505 [NCBI]
CDS location
range 45878 -> 48289
strand +
CDS
ATGGGGTATCTTCAAATGACCAGAAACGTCGAGAGCATCTTTGGAGCGGTTGTAACAGCCCCGCACCAGATTCCATACACTTATACCGCAACGGGCGGAGAGACGTTTATCTCCCTCCCGTTCTATCCTGTTACGGGCTTCATCACCATCAACGGCGGCGTCCAGGTTCCTGTTGACAACTATGAAATCGATGGTAACACTGTCAACCTCGGTCGAGCTCTAGAGGCTGATGATGTAGTGTACTGTCTGTTTGACAAGATCCTGTCCCCAGAAGATTATGAAAACGGGATTCGAATCTACAAGTTCCAGGCCGTTGGCAACGAAACAACGTTCACTCCCGACTTCACCACATACGGTGTACAGACCCTGTATATCGATGGTAAGTTCCAGGTTCCTGGGGTTGACTACAATTACAACAGCGCGACTGGTGTAGTGTCATTCCTGAATGGATCTCCGACTGCTGGTGTTTGGGTTGTGGCTGAGATGTCCATTAAACAGAATTACCTGGCGCTCTCTTCCGATAGTGGAGCCAGCTTGGTGGGGACTTCTTCAGGTAACACCGTTCAAGAAGTTCTTAATTCACATTCTGGCTCTTTCCAGACTGGGGTAAAACTCCTTAGTTCTAATGACTTAATCGTGGATCAGTCTGTTATCCCTAACCAACTTTATCGTTGGGATGGTGCATTTCCTAAAACTGTAGCTGCTGGCTCATCACCCGCATCAACTGGCGGCGTTGGCAATGGTTCTTGGGTTAGTGTTGGTGATGCGACATTAAGAGGTGAGTTAAATAATGAAGGGGTAATCAATTTCTCCCATGCTGATACGTATGGTAATGACAGTGTAGGAGCGCATCTTCAAAATGTCGTATACCCAACAGACGCCCCTTTCAATGCCGCTACAGATGGTACTACAGACACAACAGTAGCTATTAAAAGTGCAATAGCGCACTGTATATCAAAGGGTAAAAAATTAGTATTAAATCATTTGTTCATGATTACAGATACTCTGGTAATCAGTGATGGGTTGCATGTTGAGTGTCTTACTAGTGACTCAGGTGTTAAGTCTGATGTACCAGCAGGTAAATTTGCAGTAAAAATAACGGGGGCCAATTCTGGTTGGTTTGGGGGTAAAATCCTGGGTAAAAACTTACCAGAATCTACAACAGTAAGGCAGGATGGCGTACTCTTTGATGAGAATGCTGAATACTGCTTTATTACTGGTACAGAGGTTACTGGCTTCTTTGCAAAAGGTTTGCATACCTCAGATGCTGATGGTGTAGGCTATGGTATTTACGATAAAGGGTATGGTACTCTCATCTCTAAATGTTATGCAAACTCAAAGTTCTGTGTAGCTCTGGGTGGTACTGAGGGTCGCGTACTTAAGAACCGTATAACCAATAACTACCTTACATCCGGGGAGGCTAAACCATGGAGCTGGGCTAGCAACTATTGGGATGGGATAGTATCCGAGAATGCTCACAGATATGTCATCGCTTTTAATGATGTATCAGCCTGTGGACAGAGTGGAATTTACTTTGGTGGGAATGGTGGTTATTCAACAGATAACATCATCGTAAATAACACTGTTTACGCCTGCTGGAACCGTGGTATTGATATGGGTTTGTTTTCTGAAAAATCGGCAACAAATGACGTACTCAGAAATATCATCAAGGGTAACAATACCTATAACAACCGAGAAAATAATATCTGGCTTGCAGGTGTTAGTAACTGCTCAGTAGTTGGTAATACATCGTGGTTTGACACCAATTATGATGTAATTTTTGCAGGTTATCCAGGCGGTCATATTTGTATTAGTCTAGCTTCTGGTGCAAATGGGGAAGCTTGTGTAGGGAACACAATCGACTCTAATACTTGTATTGACCCTAGAGGTAATGCAGGTATAACAGTACCTACTGGGGCAACTGGTAATGTTTTTGGATCAGGTAATAATCTATCTCAAGCTGGGGCTATTTATATAGCTTCACCTGACTTGATTACGTCTAACAGATTTGAACTGGCAGTCACTGGTTCGTTCACACCAGTCCTGCTTCCTGCAAGCGGAAGTATAACCCTGTCGTCATCAAGTACAGGAGTCTTTAGGGCAACCGGCAATAGAATAGATTTTTCCGTAACAGTAAATGTATCTTCAATATCATCGCCAAGTGGGAATTTAAATATCGCCTATCTTCCAGGAATGAGTGGGAAAACAAGCTCAACATCAATGTTTATTATTGACTATTGGAATGATTTAACGTTATCAAGTGGTGTAATTCCATTGGCATCATTAAATTTAGAAAATCAAGATCAAATAACAGTCTACCGAACTGATGGGGGAAGGGTTCTCTATGACTTTTCTTCATTGATGAAATCAACATCATCGTTTATATTAAAAGGTTTTGTTGATTTTAACTAA

Tertiary structure

PDB ID
4e9fdcd930f61f31ef6155983c2f209f86f44d549758885ee8b3119184b95e0a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank