Protein

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Genbank accession
QPZ53597.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MAIITLNNNSLSSVTSLPAGVGGKVLQVVTSTQNFQKSSNSTSYIDIESSSGTVWETSITPSATSSKILVHANVNYYLEANAAQNDVRVAMRMFQKIGSGAYTQRIQHTYGGIYWYSSTRADHAGQWMPFHELISPNTTDVVTYKFQSKSFNSSNYSHVINYNDISTITLMEVAG
Physico‐chemical
properties
protein length:175 AA
molecular weight: 19210,13360 Da
isoelectric point:6,96257
aromaticity:0,10286
hydropathy:-0,22229

Taxonomy

Phage
Pelagibacter phage HTVC100P [NCBI] · taxon 2796522
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Candidatus Pelagibacter sp. HTCC7211 [NCBI] · taxon 439493
Pseudomonadota Alphaproteobacteria Candidatus Pelagibacterales Candidatus Pelagibacteraceae Candidatus Pelagibacter

Coding sequence (CDS)

Genbank protein accession
QPZ53597.1 [NCBI]
Genbank nucleotide accession
MW273924.1 [NCBI]
CDS location
range 10977 -> 11504
strand -
CDS
ATGGCAATAATAACTTTAAATAATAATTCTTTATCTAGTGTAACATCATTACCTGCTGGTGTAGGTGGTAAGGTTTTGCAAGTTGTTACTAGCACTCAAAATTTTCAAAAAAGTTCTAATTCAACATCTTATATAGATATAGAGAGTTCAAGTGGCACAGTCTGGGAAACATCAATAACACCATCTGCAACATCTTCTAAAATTTTAGTTCATGCAAATGTTAATTATTATTTAGAAGCTAATGCTGCTCAAAACGATGTAAGAGTAGCTATGAGAATGTTTCAAAAAATTGGTAGTGGTGCTTATACTCAGCGTATTCAACATACTTATGGTGGTATTTATTGGTATAGTTCAACAAGAGCCGATCATGCTGGACAATGGATGCCATTTCATGAATTAATTTCTCCAAATACTACAGATGTAGTAACTTATAAATTTCAATCTAAATCTTTTAATTCATCTAATTATAGTCATGTAATAAATTATAATGATATTTCTACAATAACTTTAATGGAGGTAGCTGGATAA

Genome Context

Tertiary structure

QPZ53597.1
ColabFold structure
Source ColabFold
pLDDT 92.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank