Phage RBP Database

Genbank accession

WVW77715.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 1,00

Protein sequence

MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVATGADIDYATNQVTGQTQKTLPAVLRDAGFSPVSWDFSTGGTLTVNDRDKVVYDPVSKTWYSYAGTLPVTVPASFNPVGNANWSPQTDPNLRGELSIIENIAELMSKTPNPELTYTVKGYAPGTTFGGGIFYWDATLPKSQHNGITVFSPTVPWDGTYTTLATFLAGTGETTPSGRGCWVRMQNSRDMLVSWGGVDITGTNVADAAVTAVIKYANTVKRSVRFDSGANIKWGFSTLVQHFDKFNLNVQCSVVLENISGIKVYAENDVEFNTDHPTYAERVVFRLKNCSEVEFSGFNFNSNFADYSTTTSDTTYKPQEWWQGFTAEGCSNLEITKHHVNACQVFVRADCTNLAANLHNKDIHVTDNMFKYVTNYCVISRNINLVEFSRNKVSFNGRKWDTFGEAFAPTTGSLNIIARDNIFTDQIAQQSCITPTIGALSVTIQGNYCRRQYGIFVELGSSSNVLISGNTSISTGERADTTHILLIGAVDGNPAGGLSNVNITANYFQGGGFAIQEYNTGNALRTGFSITNNHMIDCKLPAITNQSYIGVVVRGNYMEAPTNFPDLAIAGQRPVIDSNMFVGVRVRARDLGYSVIAPKVTNNVWRANSLGESYPALIDYTEFTALVADGNDSTAAAYTDFIVHPSNCNNAGFRRVGHTEGFTVSPTARFGAKLTDARVGDFVANSSPTASGAYAWVCVNRSTKAFSSIALSA

Physico‐chemical properties

protein length:	745 AA
molecular weight:	80631,00710 Da
isoelectric point:	5,79169
aromaticity:	0,10470
hydropathy:	-0,15933

Domain architecture

WVW77715.1

1 745 aa

ATT 65–132 · RBD 133–218 · STR 293–595 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.80
ATT

G3DSA:2.10.10.80 IPR059934 IPR011050

WVW77715.1

1745 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1559
ATT

DC_1559 DC_0317

WVW77715.1

1745 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	65	132	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR059934	RBD	DC_0541	133	218	InterPro cluster	Phage tail protein-like, small four-stranded beta-sheet domain	C-terminal	Low	Positional only	683 proteins / 690 hits
IPR011050	STR	IPR011050	293	595	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WVW77715.1

1 745 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	236	236	0,9931
Central domain	237	689	454	0,9899
C-terminal	690	745	55	0,9697

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage vB_EcoM_SHAK7693 [NCBI] · taxon 3093953

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Escherichia sp. [NCBI] · taxon 1884818

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WVW77715.1 [NCBI]

Genbank nucleotide accession

OR594180.1 [NCBI]

CDS location

range 23137 -> 25374
strand +

CDS

ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAGAAGCACCAGATTTTCGAAGCTGAGGTTATCACCGGTAAATCCGGCGGTGTTGCTACGGGTGCTGATATCGATTACGCGACAAATCAGGTTACTGGGCAGACACAGAAGACGTTACCTGCCGTGTTGCGTGATGCTGGTTTTTCTCCTGTATCGTGGGACTTTTCTACAGGCGGTACGTTAACAGTTAATGACCGCGACAAAGTGGTGTACGACCCTGTAAGTAAAACGTGGTACTCGTACGCGGGGACGTTACCAGTTACAGTTCCCGCGAGTTTTAATCCTGTAGGTAACGCTAACTGGAGTCCACAGACCGATCCTAATTTACGTGGTGAGTTATCCATCATTGAAAACATAGCTGAGCTTATGTCTAAAACGCCAAACCCAGAACTCACGTACACCGTGAAAGGCTATGCCCCCGGTACGACTTTCGGCGGGGGCATTTTCTACTGGGACGCCACCCTCCCTAAGTCACAACACAACGGCATCACTGTATTTAGTCCAACGGTGCCATGGGACGGAACCTACACCACTCTCGCGACCTTCTTAGCTGGCACAGGGGAAACCACCCCATCCGGCAGAGGATGCTGGGTCCGTATGCAGAACAGCCGCGACATGCTCGTTTCTTGGGGCGGCGTTGACATCACAGGGACGAACGTTGCGGACGCCGCTGTAACCGCTGTTATTAAGTATGCTAATACGGTCAAGCGTTCTGTTAGATTTGACTCTGGTGCAAATATTAAATGGGGCTTCTCTACCCTTGTCCAGCACTTTGACAAGTTCAATCTTAATGTGCAATGTTCTGTTGTTCTGGAGAATATCAGCGGGATTAAGGTTTACGCGGAGAATGACGTTGAGTTCAACACTGACCACCCTACTTATGCGGAGCGTGTTGTCTTTCGCCTTAAAAACTGTAGCGAAGTGGAATTCTCTGGATTCAACTTCAACTCCAATTTCGCCGACTATTCGACGACGACATCGGACACTACGTACAAGCCCCAAGAATGGTGGCAGGGCTTCACAGCCGAAGGTTGTTCTAATCTAGAAATCACTAAGCATCACGTTAATGCGTGCCAAGTATTTGTAAGGGCTGATTGTACAAACTTAGCAGCAAACCTTCATAACAAAGATATTCATGTTACAGATAACATGTTTAAGTATGTAACGAATTACTGCGTTATTTCCAGAAACATAAATCTGGTTGAATTCAGCCGCAACAAGGTTTCATTTAACGGGAGGAAATGGGATACCTTTGGTGAAGCGTTCGCTCCAACAACAGGCTCTCTCAATATAATTGCTAGAGATAATATTTTTACTGACCAGATTGCGCAACAGTCGTGTATAACTCCGACGATAGGCGCTTTATCTGTAACTATTCAGGGTAACTATTGCCGGCGGCAGTATGGTATTTTTGTTGAACTCGGTAGTTCAAGCAATGTGTTAATTTCTGGTAATACATCGATAAGTACCGGTGAGCGCGCTGATACAACACACATTCTTTTGATTGGGGCGGTAGATGGCAATCCGGCAGGTGGGCTTTCAAACGTAAACATTACCGCAAACTATTTTCAAGGCGGTGGTTTTGCCATTCAAGAATACAATACCGGAAACGCATTGCGCACTGGGTTCAGTATAACTAATAATCATATGATTGACTGCAAATTACCAGCCATCACTAACCAATCTTACATTGGTGTTGTAGTTCGCGGTAACTATATGGAAGCACCCACTAACTTTCCTGATTTAGCTATCGCAGGACAGAGGCCTGTTATAGACAGTAACATGTTTGTTGGTGTTAGGGTGCGTGCAAGAGATTTAGGGTATAGCGTAATAGCTCCTAAGGTAACCAACAATGTATGGAGAGCAAACTCCCTGGGGGAATCATATCCAGCACTTATCGACTATACCGAATTCACCGCATTAGTGGCGGATGGCAACGACTCAACAGCAGCGGCGTACACGGACTTCATTGTCCACCCTTCAAATTGTAATAATGCAGGGTTCCGCAGAGTAGGCCATACCGAAGGGTTTACTGTCAGCCCTACTGCAAGATTTGGAGCCAAGCTCACTGATGCCAGAGTAGGTGATTTTGTAGCTAATTCGTCCCCTACAGCATCTGGTGCTTATGCGTGGGTATGCGTTAACCGATCAACAAAAGCGTTCAGTTCTATCGCATTGAGCGCATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)