Phage RBP Database

Genbank accession

WBF80018.1 [GenBank]

Protein name

long tail fiber, distal subunit

RBP type

TSP

Evidence RBPdetect

Probability 0,83

TF

Evidence RBPdetect2

Probability 0,73

Protein sequence

MATLKQIQFKRSKTAGQRPAASVLAEGELAINLKDRTIFTKDDTGNIIDLGIAKGGQIDGNVTIDGTLRVNGPINNFGNFSTSGTITASNIVSATVFRSTSGSFYTRAINDTANAHLWFENTNGSERGVLYSKPQSENEGVITMRVRQGTAAGAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKAFGQYDSQSLVQYVYPGTGETNGVNYLRKVRAKSGGTIYHEICTAQTGLADEVSWWTGNTPLFKLYGIRNDGRMIIRNSLAIGTVTEGYPSSDYGNTRVMGDRYLALGDNASGLKWVRTGVIDLMANGISAATIINNGINSTKKLMVGYSRDSGSTWDFPNNNQAMFTARTDIDGNNNGDGQTHIGYSSNSKMYHYFRGTGRMSVSMGDGLLVEPGILDLKTGSNSLNLRADGTVASVQTLKLNNGLYFNGDGTNASLVFKAASGIDGTKQIMWEGGTRPGQNKSYVNVKAWGNSFNATGDKSRETIFEVADGLGYYFYAQRAAPTNDETVGPVLMQVSGSLNAKGTLTATGNLYVGGLSTHEGAVTMNNGLNLTGGSSITGQVKIGGTANALRIWNAEYGAIFRRSESNLYIIPTNQNEGKSGDIHSSLRPVRIGLNDGMVGLGRDSFIVDQNNALTTINSNSRINANFRMKLGQSTYIEAECTNTVRPAGCGSFASQNDANVRAPIYMNIERTAPSEYVPIVKQRYVNGDSTYSIGTLIAQGDFRVHYHQGNSTTGTDLSWEFRRTGDFRLPGKIIVGNTTLGTDGNITGGSGNFANLNSTIESLKTDIVSSYPIGAPIPWPTDTPPNGYAIMEGQTFDKSAYPKLAVAYPSGVIPDMRGQTIKGKPSGRAVLSAEADGIKSHSHSASASSTDLGTKTTSSFDYGTKNTNSTGAHAHTGSGSTSTNGEHSHYMEAWSGTGKGGNLMSSYAVSHRAGGTNTNAAGNHSHTFSVSTDSTGAHAHSVGIGAHTHTVAIGSHGHTITVNSTGNTENTVKNIAFNYIVRLA

Physico‐chemical properties

protein length:	1023 AA
molecular weight:	108648,94870 Da
isoelectric point:	8,82980
aromaticity:	0,07820
hydropathy:	-0,37957

Domain architecture

WBF80018.1

1 1023 aa

ATT 493–630 · ATT 808–861 · STR 862–1022 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048390
ATT

IPR048390 IPR051934

SSF88874
STR

SSF88874

IPR037053
ATT

IPR037053 IPR005003 IPR005003 IPR005003 IPR005003 IPR005003

IPR011083
ATT

IPR011083

WBF80018.1

11023 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0538
STR

DC_0538

WBF80018.1

11023 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048390	ATT	DC_0836	493	630	InterPro cluster	Long-tail fiber proximal subunit, trimerization domain	C-terminal	Medium	Text match	656 proteins / 656 hits
IPR051934	Unmapped	-	675	1023	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
SSF88874	STR	SSF88874	802	1022	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	808	861	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	813	860	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR005003	Unmapped	-	875	888	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	907	920	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	921	934	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	958	971	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	972	983	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WBF80018.1

1 1023 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	288	288	0,1359
Central domain	289	487	200	0,3246
C-terminal	488	1023	535	0,8739

Note: Constraints were applied during segmentation.
Fixed 251 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage vB_Eco_F26 [NCBI] · taxon 3003732

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

WBF80018.1 [NCBI]

Genbank nucleotide accession

OP870145 [NCBI]

CDS location

range 160168 -> 163239
strand +

CDS

ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGTCAACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATACAGGAAATATCATTGATCTAGGTATTGCTAAAGGCGGTCAAATTGATGGAAATGTAACTATTGATGGAACTTTACGCGTCAATGGACCAATAAACAACTTTGGAAATTTTTCTACAAGTGGTACTATTACGGCAAGTAATATTGTTTCTGCTACAGTATTCAGATCAACATCCGGTTCATTTTATACAAGAGCAATAAATGATACTGCAAATGCCCATCTTTGGTTTGAAAATACAAATGGCTCAGAACGTGGCGTTTTATATTCAAAACCGCAGTCTGAAAATGAAGGCGTAATTACAATGCGTGTTCGTCAAGGAACCGCAGCGGGGGCTCAAAATTCAGAATTTCATTTCATTTCTACTGATGGCGGTATCTTCCAGGCACGCAAATTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAAGCCTTTGGACAATACGATTCACAATCATTAGTTCAGTATGTTTATCCTGGAACTGGTGAAACTAACGGAGTAAACTATCTTCGTAAAGTGCGTGCTAAATCAGGTGGAACTATTTACCATGAAATTTGTACAGCTCAGACTGGGCTAGCTGATGAAGTTTCTTGGTGGACTGGTAATACACCGTTATTTAAACTATACGGTATTCGTAACGACGGTAGAATGATTATCCGCAATAGCTTGGCCATTGGTACTGTGACTGAAGGATACCCGTCAAGCGATTATGGAAATACCAGGGTAATGGGAGATAGGTATTTAGCTCTTGGCGATAATGCTTCTGGACTTAAATGGGTTCGTACTGGCGTTATTGATTTAATGGCTAACGGTATTTCTGCGGCGACTATTATTAATAATGGTATTAATAGTACTAAAAAATTGATGGTTGGTTATAGCCGTGATTCCGGTTCTACTTGGGATTTCCCAAATAACAACCAAGCAATGTTTACTGCACGCACCGATATTGATGGTAATAATAACGGCGATGGTCAGACTCATATCGGTTATAGCAGTAATTCTAAAATGTATCACTATTTCCGCGGCACGGGTCGTATGTCTGTTAGCATGGGCGATGGACTTCTTGTTGAGCCAGGTATTTTAGATCTTAAAACTGGTTCAAATTCATTAAATTTACGTGCTGACGGTACTGTTGCTTCTGTTCAAACGTTAAAGCTTAATAATGGATTATATTTTAATGGTGATGGAACTAATGCTTCTCTAGTTTTTAAAGCAGCTTCAGGTATTGATGGCACTAAGCAAATCATGTGGGAAGGCGGTACTCGACCAGGTCAGAATAAGAGTTATGTAAATGTTAAAGCATGGGGTAATTCATTTAATGCCACTGGCGATAAATCTCGTGAAACTATATTTGAAGTTGCCGATGGCCTAGGTTATTATTTTTATGCGCAGCGTGCCGCGCCTACAAATGATGAAACTGTTGGCCCTGTATTAATGCAAGTTTCAGGTTCTTTAAATGCAAAAGGAACATTGACCGCCACTGGCAACCTTTATGTGGGAGGATTGAGTACACATGAAGGTGCTGTGACCATGAATAATGGGCTTAATTTAACTGGTGGTTCTTCTATTACAGGCCAAGTAAAAATTGGTGGAACAGCAAATGCATTGAGAATTTGGAACGCCGAATACGGTGCTATTTTCCGCCGTTCGGAAAGTAATCTTTATATTATTCCAACCAATCAAAATGAAGGCAAAAGTGGAGACATTCACAGCTCTTTGAGACCTGTGAGAATAGGATTAAACGATGGTATGGTTGGATTAGGAAGAGATTCTTTTATAGTAGATCAAAATAATGCTTTAACTACGATAAACAGTAACTCTCGCATTAATGCCAATTTTAGAATGAAATTGGGGCAGTCGACATATATTGAGGCCGAATGTACTAATACGGTACGCCCAGCAGGGTGTGGTTCATTTGCATCTCAGAACGACGCAAACGTAAGAGCTCCGATTTATATGAATATAGAGCGTACTGCTCCTTCTGAATATGTTCCTATTGTTAAACAACGATATGTAAATGGCGATAGTACTTATTCTATTGGCACCTTAATTGCTCAAGGAGACTTCCGCGTTCATTATCACCAGGGCAATAGTACTACCGGAACTGATTTAAGTTGGGAATTCCGCCGCACCGGTGACTTCCGCTTACCTGGTAAAATTATTGTAGGCAACACAACTTTAGGAACTGATGGTAATATCACCGGTGGCTCTGGTAACTTTGCTAACTTAAACAGTACGATTGAATCACTTAAAACTGATATTGTTTCAAGTTATCCTATTGGAGCTCCAATTCCATGGCCAACGGATACTCCTCCTAATGGTTACGCTATTATGGAAGGTCAGACTTTTGATAAGTCTGCATATCCAAAGTTAGCTGTTGCATATCCTAGTGGTGTTATTCCAGATATGCGTGGACAAACTATCAAGGGTAAACCTAGTGGACGAGCCGTGTTAAGTGCAGAAGCTGATGGTATTAAGTCTCATAGCCATAGTGCATCTGCTTCAAGTACTGACTTAGGCACTAAAACCACATCAAGCTTTGACTATGGTACGAAGAACACTAATAGCACTGGTGCTCACGCACACACTGGTAGTGGTTCTACTAGCACAAATGGTGAGCACAGCCACTACATGGAGGCATGGAGTGGTACTGGTAAAGGTGGTAATCTGATGTCATCATATGCCGTATCACACAGAGCGGGTGGGACTAACACTAATGCGGCAGGGAACCACAGTCATACCTTCTCTGTCTCAACTGATAGTACTGGTGCACACGCTCACTCTGTAGGTATAGGTGCTCATACCCACACGGTAGCGATTGGTTCGCATGGTCATACTATCACTGTAAATAGTACAGGTAATACAGAAAACACGGTTAAAAACATTGCTTTTAACTATATCGTTCGTTTAGCATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)