Protein

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Genbank accession
YAJ19859.1 [GenBank]
Protein name
collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MEQLVLNINKVPVVEASQFKYSDHIFVSVNGQFKRMKRTDLITLLSADVKGEKGERGPIGLQGRTGATGATGATGATGATGDKGDKGDRGDRGFRGWSPVFKSVAEDGSIYLYLSDWVGGENTKPDVLGYISPTGIVNYITEGATAINTDFAPQINDLQANKLDVGSTTSAIPEGSNLYYTDERVRAATLTDLSTATSTAIVATDTVLSAFGKAQAQLNLKQNSASLGTDVQATVLSTYTVGGNTAIANTDTIAAAFGKAQGQINARQLSANLSSDVQALVLSSYVVGSNTALANTDTFIAALGKLQGQINAREVAANVPADVRATVLTGLSTATSTAITATDTVLSAFGKLQAQVNLKQDSSTLAANVRSTTLTGFSATPNSAVVAADTLLAAIGKLQAQVDSLSSRVTALGG
Physico‐chemical
properties
protein length:414 AA
molecular weight: 42598,01470 Da
isoelectric point:5,37182
aromaticity:0,05314
hydropathy:-0,01643

Domains

Domains [InterPro]
IPR008160
50–96
IPR008160
YAJ19859.1
1 414
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbYfo_2
[NCBI] 		3458431 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAJ19859.1 [NCBI]
Genbank nucleotide accession
PX121509 [NCBI]
CDS location
range 89291 -> 90535
strand +
CDS
ATGGAACAACTTGTTTTAAATATTAATAAAGTCCCTGTTGTGGAAGCATCTCAATTTAAATACTCAGACCATATTTTTGTTTCAGTTAATGGTCAATTTAAAAGAATGAAAAGAACCGATCTCATTACCTTATTGAGTGCTGATGTTAAGGGTGAAAAAGGTGAGAGAGGTCCGATTGGTTTACAAGGTAGGACTGGAGCTACAGGTGCAACTGGTGCCACAGGAGCTACAGGTGCAACTGGAGATAAAGGCGATAAGGGAGATCGTGGAGATCGTGGTTTCCGAGGATGGTCACCAGTCTTCAAATCAGTGGCTGAAGATGGTTCTATTTACCTATACTTAAGTGATTGGGTTGGTGGTGAAAATACAAAACCTGATGTTCTAGGTTATATCTCACCTACAGGGATTGTAAACTATATCACTGAGGGCGCAACTGCAATCAACACTGACTTTGCACCACAAATCAATGACCTTCAAGCAAATAAACTAGACGTTGGCTCTACAACTAGTGCTATCCCTGAAGGTTCAAACTTGTATTATACAGATGAACGAGTTCGTGCTGCAACCCTTACAGATCTCTCTACAGCGACCTCTACAGCTATTGTAGCGACCGATACTGTATTAAGTGCATTTGGAAAGGCACAGGCTCAACTTAACCTTAAACAGAACAGTGCAAGTTTAGGAACAGATGTACAAGCTACAGTTCTATCTACTTACACTGTTGGTGGTAATACAGCAATTGCCAACACTGATACCATAGCAGCAGCTTTTGGTAAAGCTCAAGGGCAAATTAATGCTAGACAACTTTCAGCCAATCTTTCATCTGATGTTCAGGCTTTAGTACTTTCAAGTTATGTTGTTGGTTCTAACACAGCTTTAGCCAATACAGATACTTTCATTGCTGCTCTTGGAAAGTTGCAAGGTCAGATCAATGCTAGAGAGGTAGCTGCCAATGTACCAGCAGATGTTAGGGCAACAGTTCTTACAGGTCTCTCCACAGCGACCTCTACAGCAATTACTGCTACAGATACTGTCTTGTCAGCCTTCGGAAAATTACAAGCCCAAGTCAACTTAAAACAGGACTCATCTACTCTAGCTGCAAATGTAAGATCAACAACCCTTACAGGTTTCTCTGCAACACCAAACTCAGCAGTAGTTGCAGCAGATACACTATTGGCAGCAATAGGAAAATTACAAGCTCAAGTTGATAGTTTATCTTCTAGAGTAACAGCACTAGGAGGATAA

Tertiary structure

PDB ID
0e53dde9176c4db1d23a0b19e6a5a4f9fec42931055485cf268e4c5462e7a05a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5611
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50