Protein

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Genbank accession
YP_009857927.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MALKTKIIVQQILNIDDITTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESETNAKDSEHESAISAEASEASASQSAISATQSAASATKSAESSAAAKTSETNAKTSETNAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAAASAASASDSKGFRDEAEAFAAQASTSALAAKNSEINTKTSEINSKASEDAAKLAQQGALGSANTATQAMTTTKGYRDEAEGFKNTATTAATTATDKALEAAGSATMAGEKAIAATNAADRAEIAAASAEQVTQASLKKDQNLKDLTDKVAARKELQIQAVVSKDSNNVGDYNSFTSPNVVYELRLANDGGWRVARNSDNATSALPIGAGGTGAENVEGAKINFGIDRLKQTETETMMYAPGINSPYRITIRPDAAWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAITIPDNSNILGFMSTYAESGYYSSGELVTYQPPEASGWWMYELHVHLKNANGHVGYGNIVATTMNGNKWGIICTNGSWGEWYRIARSDRQLMLLSPDAQSALGDYSIAIGDHDSGLKWDSDGHISAFADSARIFAWTPSGINTYGTISSYVGDNIMGMYVNGTRRGDLNALIAGQVEGGAFSAWRSRASGLLVGHTSFDSAVNVFKSVYLGKDWISGMDSVKWSSGGAEVHLYVGGTEYIFDAAGNGSASNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNSDGKLDPKGEAIKGINYNGVVALLVNAFKEQKVKIDNQQEEINALRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:850 AA
molecular weight: 89602,60130 Da
isoelectric point:5,00140
aromaticity:0,06706
hydropathy:-0,36682

Domains

View on InterPro
Domain architecture
YP_009857927.1
1 850 aa
CHP 716–821 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009857927.1
1 850 aa
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,7535
Central domain 233 431 200 0,4134
C-terminal 432 850 418 0,7330
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage bombadil [NCBI] · taxon 2713285
Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus bombadil
Host
Salmonella enteritidis [NCBI] · taxon 149539
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_009857927.1 [NCBI]
Genbank nucleotide accession
NC_048866.1 [NCBI]
CDS location
range 32068 -> 34620
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACATTACAACTACTGCTAGTAAATATCCTAAGTACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGATTCTGAGCATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAATCTGCTATTTCTGCTACTCAATCTGCTGCGTCCGCTACTAAATCTGCAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGCTTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAATTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATTAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGCTACAGAGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACAGCAACAGACAAGGCCCTGGAGGCTGCTGGTAGTGCTACAATGGCAGGAGAGAAAGCAATTGCAGCTACCAATGCAGCTGACAGAGCGGAAATAGCAGCTGCATCGGCAGAACAGGTTACGCAAGCGTCGTTGAAGAAGGATCAGAACCTTAAAGACCTTACTGATAAAGTTGCTGCAAGGAAGGAACTTCAAATTCAAGCGGTAGTGAGCAAGGACTCTAATAATGTGGGTGATTATAACTCATTCACCAGCCCCAATGTAGTATATGAACTTAGACTGGCTAATGATGGCGGTTGGCGTGTTGCAAGAAATAGTGATAATGCTACATCGGCTCTTCCTATTGGTGCTGGCGGTACTGGTGCGGAAAACGTTGAGGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTACGCACCAGGGATTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGCGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGTACTGGATCTAATACTGAAGTTGGCGCAAGAAAGAACTTAAACACTCCTGTTGGTGGTCAAGCAATTACCATCCCGGATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAGAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACCTTAAAAATGCAAACGGCCATGTTGGGTATGGAAATATTGTTGCAACCACAATGAACGGCAATAAATGGGGTATCATTTGCACTAATGGCTCTTGGGGTGAATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCTGATGCTCAATCAGCTCTTGGTGATTACTCTATAGCAATTGGTGATCATGACTCTGGTTTGAAATGGGATAGTGATGGTCACATAAGCGCGTTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGTATAAATACTTACGGGACCATATCCTCTTATGTTGGGGATAATATAATGGGCATGTATGTAAATGGGACTAGGCGTGGAGATCTAAACGCGCTTATTGCTGGTCAAGTTGAGGGTGGTGCTTTTAGTGCGTGGCGTAGTCGTGCGTCTGGTTTGTTGGTAGGGCATACTAGTTTTGATTCGGCTGTCAACGTATTTAAATCTGTTTATTTGGGTAAGGATTGGATATCGGGAATGGATTCTGTTAAATGGTCCTCTGGAGGTGCTGAGGTTCATCTTTATGTTGGTGGAACTGAGTATATTTTTGATGCCGCTGGTAATGGTAGCGCCTCAAACTGGGTTAGTAGATCTGATATTAGATTGAAAGCGCATTTAAAAGAAATTGAAACCGCATCTGACAAAATTGATTATCTAACTGGTTATACTTACTACAAACGCAATAATCTAATTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATTGCTCAAGATGTTGAAAGGGTTTTGCCTGAAGCGGTTCATTCTTTGAATAGTGATGGTAAGCTAGATCCAAAAGGTGAGGCAATCAAAGGTATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGTAAAGATTGATAATCAACAGGAGGAAATTAACGCATTACGCAACGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCATAA

Genome Context

Tertiary structure

YP_009857927.1
ESMFold structure
Source ESMFold
pLDDT 64.8
Oligomeric state monomer
Download structure