Protein

View in Explore
Genbank accession
YP_009831901.1 [GenBank]
Protein name
collagen triple helix repeat-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MDSQSLLAGNKLSPATHFDSLAQLAEQWAFNPTVVGSSPTGITLEASIFGCWSLCVYNRYDTSLLNSGDIMTRLPIPDSDSGTWDDILNDFLLIEHNNDGTLRSVARPADVAAKYTKPGPGIPLSDLTVSVQNSINSIGFMTPQVPLPADIGYLAYSFDPLIADGSVGPVAGTIQLVRVVLRSPQTITNIVAHVGTAGGTLTSGQNFAGLYDATGARVALTADQTTAWGTTGAKTMALTAPYAAAAGYYYVAFLSNGTTPPLFRSKTNLGGDFISGTSPANSFRFATNTTGTTLPASMTLNANVVSDKAIMVALT
Physico‐chemical
properties
protein length:315 AA
molecular weight: 32884,64370 Da
isoelectric point:4,75603
aromaticity:0,08254
hydropathy:0,12603

Domains

View on InterPro
Domain architecture
YP_009831901.1
1 315 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Streptomyces phage BRock [NCBI] · taxon 1913591
Uroviricota Caudoviricetes Borockvirus
Host
Streptomyces sp. [NCBI] · taxon 1931
cellular organisms Bacteria Bacillati Actinomycetota Actinomycetes Kitasatosporales

Coding sequence (CDS)

Genbank protein accession
YP_009831901.1 [NCBI]
Genbank nucleotide accession
NC_048650 [NCBI]
CDS location
range 100187 -> 101134
strand -
CDS
ATGGATTCGCAGAGTCTCCTTGCCGGTAATAAATTGAGTCCGGCTACCCACTTTGATTCCTTAGCTCAGTTGGCAGAGCAGTGGGCTTTTAACCCAACGGTCGTCGGTTCGAGCCCGACAGGAATCACTTTAGAGGCCAGTATCTTCGGATGCTGGTCTCTTTGCGTATATAATCGTTATGACACATCACTTCTGAATTCAGGTGACATAATGACTAGACTTCCAATTCCAGACAGCGATAGCGGTACTTGGGATGACATTCTTAATGATTTCCTTCTTATTGAGCACAATAACGATGGAACTCTGAGAAGCGTTGCCCGTCCTGCTGACGTTGCTGCCAAGTACACAAAGCCGGGTCCTGGAATCCCTCTATCCGATCTGACAGTGTCAGTTCAGAACAGTATTAATTCCATTGGATTCATGACTCCTCAAGTGCCCCTCCCTGCGGATATCGGCTACTTGGCGTACTCCTTTGACCCATTGATCGCTGACGGCTCTGTGGGACCTGTAGCAGGTACCATTCAGCTTGTACGCGTGGTGCTGCGTAGTCCTCAGACGATTACCAACATCGTTGCGCACGTTGGCACAGCCGGAGGTACCCTTACCTCTGGACAGAACTTTGCGGGGCTCTACGACGCCACCGGAGCGCGTGTAGCGCTTACGGCAGACCAGACTACGGCTTGGGGGACCACAGGCGCCAAGACAATGGCTCTGACGGCTCCTTACGCGGCTGCGGCTGGTTACTACTACGTGGCCTTCCTGTCCAACGGAACTACTCCTCCTCTATTCCGTAGCAAGACGAATCTTGGTGGAGATTTCATTTCCGGTACTTCTCCTGCGAATTCTTTCCGTTTCGCGACGAACACCACAGGAACTACTCTTCCTGCGTCCATGACTTTGAACGCTAACGTGGTTTCTGACAAGGCCATTATGGTGGCGCTAACGTGA

Genome Context

Tertiary structure

YP_009831901.1
ESMFold structure
Source ESMFold
pLDDT 65.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Streptomyces 5a phage BRock Crossman,A., Baron,S., Jamdagni,P., Khatri,P., Sharma,D., Pandey,M., Goyal,S., Kumar,S., Phogat,A., Chawla,G., Pasricha,M., Gupta,K., Bazzad,D., Aggarwal,V., Poughat,A., Singh,K., Rana,P., Gautam,R., Sharma,V., Tyagi,D., Shahi,A., Jangra,N., Malik,M., Sidhu,P.K., Malik,S., Ghalyan,Y., Sharma,S.S., Malik,A., Chuttani,R., Bamal,N., Bhadula,D., Batra,A., Temple,L. and Nehra,K. 2020-08-27 — GenBank