Phage RBP Database

Genbank accession

XMN67798.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,83

TSP

Evidence RBPdetect2

Probability 0,73

Protein sequence

MAYSWQESVVPAGTQDIQCDIEYLNKSYIHVYLDGDETSAFTWTSATNIRLDVPLSKETVVLLTRKTEREYLYIEFASGAPFIETNVDTQNTQFLHLAQELVEGRAIPGFYGDVSFNGYRITHVGPPVDDGDAANKAYVDEAKADAVSYTDSKVAAEAAARAAADLSLSNRLVDEAAARAAGDLELKNSIAANRDSSLRVPEPYIPPVAELNLRRSMLLGFNSLGYPVPIAGQTATADLAIKLASEGGSQLIFGLGNIIGTTSTILVTDGDYETYQTNGFYEQGDGGEAIWTATGNTVVAKAGTHDVTAGLVYNANGKEYALTLKGDSIRVQANGAKSYTYAECTDTTTDDFVCLGQVINGIQAHMTLGVSTGNNINTYDGGKRVNIVVPTADYRIGKEAAKLYSGVAYHLNAARIFVFAGASYKYSVTGKRLNGFQHGVDEITEKWEAVNEGIYWGSVSLQNTSIHGGTLFGDHTIRALRDDCSSGVGVLVLNPEGFSTHDLVIRETFMWAMVETTAEVEATEFNQNGHAFDNDSIDYKYIVDAWVNAGITSRFGNFNRTAHYNSKFMGGRRGTYRNGCDWSALYNCEVTNRLAWRNAANVSGAIPEYIAVCTGTALDVSGGYWGPAAAKDYNAQYGTVYSTAQNHSFKAVYTEWTYNFITVSAWGFNGKASRLQGLHLDLVSVYKDNFTEYSQIRFEGGCFGTIDDGGNYTYPEGFTHYDTPNGQTAYSIGSPVRDTGAFRHTGFDFKYGPYNMYLTAGTDWDSWRDRPYAKEMFNPYGMQINSGTAFLPWQVPAVKSMVCFWIKDLTGNFDPRNIVAWITAASQDGPNTDEALYKSFAENVVDFGNGYKMLMLAQKRLSAWDGQYTFARNANITITVPAATPIVLKAVEAYTGGIPLFPNGCGNYTPESNGASILSPVTNQVGLDSSLGGGLFFNGDIIGPWVHMRRTASGYRYVPSLTAGYTLSKKMVTGGYALDAAYKVAFNATITAVNSNNTTIVEVPTAQLPYIAVGIPLYVTGGSSTSATGTFHLIKRLANADGTSSARYLVQGVLGAVGDVLSVDQNQLPSYTFFNDMNYNALTAATLTLTGTSVATAHRSSVSAGIGYGGASGTKALEWYFNGGTTPTHRIVASSASGMSVEAGGNLSVVGNIFPSADNTYSFGLASSRATTVYAVNSAINTSDARRKTVPRDDSEAEVAAFYAIGQLPGVWQWLDKYQSEGDAARLHSGPTVQAAMAIMEAHGLDWTKYAAFCYDTWEATPAVVEEWEAEWEDVPGTPAELNEEGVVVVEEVPATRVLVREAGSRVVQEEVPAGDLYAFRKEELLFWITRATIAEQNKLRARIEALEAK

Physico‐chemical properties

protein length:	1350 AA
molecular weight:	146130,79230 Da
isoelectric point:	4,95257
aromaticity:	0,11259
hydropathy:	-0,18281

Domain architecture

XMN67798.1

1 1350 aa

ATT 11–103 · RBD 1169–1350

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604 IPR036388

IPR030392
CHP

IPR030392

cd10144
CHP

cd10144

IPR030392
CHP

IPR030392

XMN67798.1

11350 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1609
STR

DC_1609

XMN67798.1

11350 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	11	103	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR036388	RBD	IPR036388	1169	1350	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits
IPR030392	CHP	DC_0088	1183	1245	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
cd10144	CHP	DC_0088	1183	1336	InterPro cluster	cd10144	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	1183	1350	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XMN67798.1

1 1350 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	322	322	0,9896
Central domain	323	1051	730	0,9850
C-terminal	1052	1350	298	0,9079

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage P7285 [NCBI] · taxon 3349462

Viruses unclassified bacterial viruses

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XMN67798.1 [NCBI]

Genbank nucleotide accession

PQ133621.1 [NCBI]

CDS location

range 22243 -> 26295
strand -

CDS

ATGGCATACAGCTGGCAAGAGTCGGTAGTGCCTGCGGGTACGCAGGATATTCAGTGTGATATTGAGTACTTGAATAAATCCTACATTCACGTTTACTTAGACGGAGACGAGACCTCCGCTTTCACCTGGACCAGCGCTACCAATATTAGACTGGATGTGCCACTGTCTAAGGAGACTGTGGTACTGCTCACTCGTAAAACCGAGCGGGAGTACTTGTACATCGAGTTCGCTAGCGGTGCCCCATTTATTGAGACTAACGTAGACACCCAGAACACGCAGTTCCTGCACTTAGCGCAAGAGCTAGTGGAGGGGCGGGCTATTCCTGGATTCTACGGGGATGTAAGTTTCAACGGGTACCGTATAACACATGTAGGCCCACCGGTCGATGATGGCGATGCCGCTAACAAGGCTTATGTCGATGAGGCGAAAGCCGATGCAGTTAGCTACACAGACTCTAAGGTAGCTGCGGAAGCAGCAGCGCGCGCCGCTGCAGACCTGTCTCTGAGTAACCGTTTGGTTGATGAGGCGGCGGCACGGGCGGCAGGGGACCTCGAACTTAAAAACTCTATAGCTGCAAACAGGGACAGTTCACTGCGTGTGCCTGAGCCTTATATTCCCCCGGTGGCTGAACTGAACCTGCGTAGAAGCATGTTGCTCGGGTTCAACTCCCTGGGGTACCCGGTACCCATTGCAGGTCAGACTGCAACTGCAGACCTAGCAATCAAACTGGCGTCTGAGGGTGGTTCTCAGCTGATATTCGGGCTGGGCAACATTATCGGCACCACCAGCACCATCCTAGTTACTGATGGGGATTACGAAACCTACCAAACCAACGGCTTTTACGAGCAGGGGGATGGTGGTGAGGCTATCTGGACTGCCACAGGAAACACAGTGGTTGCGAAGGCGGGTACCCACGACGTAACTGCAGGCTTAGTGTATAATGCCAACGGCAAAGAGTATGCCCTGACACTTAAAGGGGACTCTATACGCGTACAAGCAAACGGTGCTAAATCATATACGTATGCAGAGTGTACCGATACTACCACTGATGATTTTGTGTGCTTGGGCCAGGTTATTAATGGCATACAGGCGCACATGACTCTGGGGGTATCCACCGGTAACAATATCAATACGTATGATGGTGGTAAGCGTGTAAATATCGTCGTGCCTACCGCAGATTACCGTATCGGTAAAGAGGCCGCCAAGCTCTACTCTGGGGTAGCGTATCACCTGAACGCTGCACGTATCTTTGTATTTGCAGGTGCATCCTACAAGTATTCTGTTACCGGTAAGCGTTTAAACGGCTTCCAGCACGGCGTGGATGAGATTACCGAGAAGTGGGAGGCCGTGAATGAGGGTATTTACTGGGGTTCTGTTAGTTTACAGAACACATCCATCCACGGCGGCACCTTGTTCGGGGACCACACAATCCGCGCCCTGCGTGATGATTGTTCTTCGGGTGTAGGTGTACTCGTACTGAATCCGGAAGGGTTCTCTACACATGACCTAGTAATCCGTGAAACGTTTATGTGGGCCATGGTGGAAACTACTGCCGAAGTAGAGGCCACTGAGTTTAACCAGAATGGGCATGCGTTCGATAACGACAGTATTGATTATAAGTATATAGTCGATGCTTGGGTTAATGCAGGTATCACCAGCCGCTTTGGTAACTTTAACCGCACCGCGCACTACAACAGTAAGTTCATGGGTGGTCGTCGAGGCACTTACCGCAATGGTTGTGACTGGTCAGCCCTGTATAACTGTGAAGTAACTAACCGTTTAGCGTGGCGTAACGCAGCGAACGTATCCGGAGCTATACCGGAGTATATCGCAGTATGTACCGGCACCGCCCTGGATGTGTCTGGGGGCTATTGGGGTCCTGCTGCTGCCAAGGACTACAACGCCCAGTACGGTACAGTTTACTCCACCGCACAGAACCACTCCTTTAAGGCTGTATATACCGAGTGGACCTATAACTTCATCACCGTCAGTGCCTGGGGCTTTAACGGGAAAGCGTCGCGTCTGCAGGGTCTGCACTTAGACCTCGTCAGCGTGTACAAGGATAACTTTACCGAATACTCTCAGATTCGTTTTGAGGGTGGGTGCTTTGGTACTATTGACGACGGAGGCAACTACACCTACCCGGAAGGGTTTACACACTACGACACGCCTAATGGGCAGACGGCATACTCCATAGGTTCCCCGGTCCGGGATACCGGTGCATTTCGTCATACTGGTTTCGACTTCAAGTATGGCCCGTACAATATGTACCTCACTGCTGGCACTGACTGGGATTCGTGGCGTGACCGTCCGTATGCTAAAGAGATGTTCAATCCCTACGGCATGCAGATTAACAGCGGAACCGCGTTCCTGCCGTGGCAGGTTCCTGCAGTTAAGTCTATGGTCTGCTTCTGGATTAAGGACTTAACAGGCAACTTCGACCCACGAAACATTGTGGCGTGGATTACTGCTGCTAGTCAGGACGGGCCGAATACCGACGAAGCACTGTATAAGTCCTTCGCTGAGAATGTTGTGGACTTTGGTAACGGCTATAAGATGCTTATGCTGGCACAGAAGCGCCTCAGTGCGTGGGACGGCCAGTATACATTTGCCCGTAATGCCAACATCACCATAACTGTACCGGCTGCGACTCCGATTGTCCTCAAGGCTGTGGAAGCATATACCGGAGGTATTCCGTTATTCCCTAACGGGTGCGGAAATTATACTCCGGAGTCTAACGGCGCAAGTATCCTGAGTCCGGTAACTAACCAGGTTGGGTTAGATAGCTCTCTTGGTGGTGGCCTGTTCTTTAACGGGGACATCATTGGGCCTTGGGTGCATATGCGTCGTACTGCTTCTGGGTACCGCTACGTACCATCCCTAACCGCTGGCTATACGCTTTCTAAGAAGATGGTGACTGGAGGCTACGCGCTGGATGCCGCGTACAAGGTGGCGTTCAACGCTACAATTACGGCGGTAAACTCCAACAACACCACTATAGTTGAGGTCCCAACTGCGCAGTTACCGTATATCGCAGTAGGTATTCCGCTTTACGTTACCGGCGGTTCGTCTACGTCTGCTACTGGAACTTTCCATCTCATCAAGCGTCTTGCTAATGCAGATGGAACCAGTTCAGCGCGGTACTTAGTACAGGGTGTATTGGGCGCTGTTGGGGATGTGCTCTCTGTAGACCAGAACCAGCTTCCAAGTTATACGTTCTTTAACGATATGAACTATAACGCCTTGACTGCGGCCACTTTGACTCTCACCGGTACTTCGGTAGCCACTGCACACCGCTCCAGCGTATCCGCTGGTATCGGTTACGGTGGTGCGTCTGGTACTAAGGCGCTAGAGTGGTACTTCAATGGTGGGACTACCCCTACCCATAGAATCGTAGCTTCCTCTGCTTCTGGTATGAGCGTAGAGGCTGGGGGCAACCTTTCCGTGGTGGGTAACATCTTCCCATCCGCAGACAACACCTATTCCTTCGGCCTGGCATCCAGCCGCGCTACCACTGTGTACGCAGTGAACAGTGCTATTAACACTTCGGATGCACGTCGTAAGACTGTTCCGCGAGATGACTCTGAGGCAGAGGTAGCTGCGTTCTACGCCATTGGCCAACTCCCCGGGGTGTGGCAGTGGTTAGACAAGTACCAGTCTGAGGGGGATGCTGCGCGTCTACACTCCGGCCCCACTGTGCAGGCAGCTATGGCTATCATGGAAGCACACGGCCTGGATTGGACTAAGTATGCGGCGTTCTGCTACGACACTTGGGAGGCTACTCCGGCAGTAGTTGAGGAGTGGGAGGCCGAGTGGGAGGATGTTCCGGGGACCCCAGCCGAGCTTAACGAGGAAGGGGTTGTGGTGGTAGAAGAGGTACCGGCAACCCGTGTGCTGGTGCGGGAAGCTGGTTCCCGTGTAGTTCAGGAGGAGGTGCCTGCTGGGGACCTGTACGCGTTCCGCAAGGAGGAGCTGCTGTTCTGGATTACTCGTGCGACCATTGCGGAGCAGAACAAACTCCGGGCTCGTATCGAGGCTCTAGAGGCTAAGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)