Protein

View in Explore
Genbank accession
YP_010671784.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,48
Protein sequence
MALQLDMFYRVPLGRKLTNSEVDTNFSRLATACGQLEQMIGAGSNPQPAIDAAIAAHVAQANPHTQYLIEAPNDNKTYGRRNQTWVETGGLSRINTSISTATSFVPDYYVVRDNCGVVFEHVAASYANNPSKAVIPAGLFHMIGGLDDQEGAQGGNRLDGHIICVFNLTSINTPIDFAIGQEIRLNCNKSKVKEFIATQHVIQPTNQGTGTCDKYVLENFNDMRSAVTHIGKITREFLDPRIITTHAGGTFHAGDTITASRKLTLSDAGKSFMVNSNNNVTLTIPRDWPAGAEMTFVQAGAGKIIIALESWDTNAMYSRGDRVQTEKLLDEVTIRSFQYGAIVLTFNLG
Physico‐chemical
properties
protein length:349 AA
molecular weight: 38032,46790 Da
isoelectric point:6,13761
aromaticity:0,07736
hydropathy:-0,18453

Domains

View on InterPro
Domain architecture
YP_010671784.1
1 349 aa
STR 50–101 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010671784.1
1 349 aa
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,6435
Central domain 133 331 200 0,1011
C-terminal 332 349 17 0,9973
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas virus PBPA162 [NCBI] · taxon 2588096
Uroviricota Caudoviricetes Queuovirinae Iggyvirus PBPA162
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Coding sequence (CDS)

Genbank protein accession
YP_010671784.1 [NCBI]
Genbank nucleotide accession
NC_070971 [NCBI]
CDS location
range 15444 -> 16493
strand -
CDS
ATGGCACTCCAACTCGATATGTTCTACCGCGTCCCGCTGGGCCGCAAACTGACTAACTCTGAAGTTGATACCAACTTCAGCCGCCTGGCTACAGCTTGTGGTCAACTGGAGCAAATGATAGGCGCAGGTAGCAACCCGCAGCCTGCCATCGATGCCGCCATTGCCGCGCACGTTGCGCAGGCAAACCCTCACACCCAATACCTCATCGAAGCCCCCAACGACAACAAGACATATGGGCGTCGAAACCAAACTTGGGTTGAAACTGGGGGCCTTTCTCGTATCAACACCAGCATCAGTACCGCCACCAGCTTCGTTCCGGACTACTACGTGGTTCGGGACAACTGTGGTGTTGTGTTCGAGCATGTGGCCGCAAGCTATGCCAACAACCCGTCCAAGGCTGTGATCCCGGCTGGCTTGTTCCATATGATTGGCGGCCTGGATGACCAAGAAGGTGCGCAAGGTGGTAACCGTCTGGACGGCCACATTATTTGCGTCTTTAACTTGACAAGTATCAACACGCCAATCGACTTTGCCATTGGGCAAGAAATTCGCCTGAACTGCAACAAGAGCAAAGTCAAAGAGTTCATTGCTACCCAGCACGTTATCCAACCAACCAACCAGGGCACCGGCACCTGCGACAAGTATGTGCTGGAAAACTTCAACGATATGCGCAGCGCTGTCACGCATATCGGTAAGATTACGCGGGAGTTCCTGGACCCTCGCATTATAACCACACACGCCGGGGGTACTTTCCATGCTGGCGACACCATTACCGCCAGCCGTAAGCTCACGCTGTCCGACGCCGGCAAAAGCTTTATGGTTAACTCCAACAACAACGTAACCCTGACCATCCCCAGGGACTGGCCGGCAGGTGCTGAAATGACGTTTGTACAGGCGGGTGCCGGCAAAATCATTATTGCCCTGGAGTCCTGGGATACCAACGCCATGTACTCCCGTGGTGACCGGGTCCAAACTGAAAAGCTGCTGGACGAGGTTACCATCCGCAGCTTCCAGTACGGCGCCATTGTCCTCACCTTCAACCTTGGCTAA

Genome Context

Tertiary structure

YP_010671784.1
ESMFold structure
Source ESMFold
pLDDT 60.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage, PBPA162, infecting Pseudomonas aeruginosa Myung,H., Hong,H. and Cho,J. 2020-08-03 — GenBank