Phage RBP Database

Genbank accession

XJP46876.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,74

TF

Evidence RBPdetect2

Probability 0,54

Protein sequence

MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDVEHCVVIPETYEMVTDSNGEFTMDLEAATSAYRVTAVGGDDEYEDDPCSQYTFTFYVPVSDDPIYVQELILMPPPNNLPWDEEAMNKISQAVVDARNARDDAEESAVHAEAQVGLAAEQVELAKYQVDLAKAEVAKASDQVDLAKAEVTKAADQVGLAKEEVTKAADQVGLAKEEVTKAADQVGLAKEEVTKAADQADRAKAEADRSSTQATAAAASAAQAKNEADRSKTEADRARELADGVAEKVEGGSLPPLVGMNETFTYEGTDPYMWESSGPIWRSSEDGVLFVAKTDGSNSRAFLRKDAEFPAGHWIVYLRIRTQNGLPGQNRCAQIRLMEEDNKECSLYFNLGTDNVPTPGVITMQYGYEGASDRTVASMFSPVNTELWMDLAIKYDAVNRHVELFRRLPNSTWEKGEGRLMVDALKPVAIEVSSFPVSPKDWWLHLDYISVCKPNLICYGDSIAAGQNEYGVTRGTEDYHSHRNWAGTWFAKAPLYATNRNNLVLVQGVEGRRTWQYLSHLSEISGSGVKVVFLHASTNDVYEPSMTQSKRTSDTQAIVDQLHAVGAQVVLFNSMQGTKAYNDASTGAVKLRDYTDTWWSTELPKVTGLAQTLDIARLLAKDGYMDPVLAADDGLHLTDAAAQKIAAKLGQFFSNSSDTNGFAPLDSPTFTGIPTVPTQTPLLPFGKTIANTEYVVTFLQDWTSRYGYGELSMASHTGAQLSGSGVRSGYYHVPAGSGNPLPGDLSSALAFVDHKSYDTNKGWQLWNPAYSGRLFIRTTNASGVWQTPVELATFTWLDANNVTKPRTLKFMELPVFNPTGSPTLSGFVPIQDSADGGWRNLSATPTGVALLGAASAGGALNYIGGMPIANQTLPDNNIDNAASNGFQRVPNGTSGLPLNIGDINGHSAITAVFDASIKYQLLFPRTTGVESYSNSVFYRARLDNGWESWVRLLASNQLEGNVTNDLLTSAVFQSNGNNSLNVGRSVRLANGTQIVSATVRLTFASEGILNYMYTYPMGFIEPPAVIVQPIEGPGADINGMPISAVMGPFTYNVANGNVLMQCFRVVGYTDTAFASNSFINCSVVAIGRWK

Physico‐chemical properties

protein length:	1120 AA
molecular weight:	121520,30440 Da
isoelectric point:	4,85936
aromaticity:	0,09107
hydropathy:	-0,26536

Domain architecture

XJP46876.1

1 1120 aa

STR 477–688 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil Coil Coil IPR036514

IPR051532
Unmapped

IPR051532

SSF52266
STR

SSF52266

cd00229
ENZ

cd00229

IPR013830
ENZ

IPR013830

XJP46876.1

11120 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0617
ATT

DC_0617 DC_2023 DC_0711

XJP46876.1

11120 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	118	145	Coils	Coil	-	-	-	-
Coil	Unmapped	-	148	187	Coils	Coil	-	-	-	-
Coil	Unmapped	-	216	236	Coils	Coil	-	-	-	-
Coil	Unmapped	-	251	271	Coils	Coil	-	-	-	-
IPR051532	Unmapped	-	257	682	InterPro	Diverse Ester Hydrolysis Enzymes	-	-	-	-
IPR036514	STR	IPR036514	477	688	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
SSF52266	STR	SSF52266	483	681	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
cd00229	ENZ	DC_0001	486	682	InterPro cluster	cd00229	C-terminal	High	Text match	480 proteins / 783 hits
IPR013830	ENZ	DC_0001	488	673	InterPro cluster	SGNH hydrolase-type esterase domain	C-terminal	High	Text match	480 proteins / 783 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XJP46876.1

1 1120 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	286	286	0,9961
Central domain	287	531	246	0,5873
C-terminal	532	1120	588	0,7365

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage BWKH3_R8_1A [NCBI] · taxon 3348347

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Pseudomonas aeruginosa [NCBI] · taxon 287

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Genbank protein accession

XJP46876.1 [NCBI]

Genbank nucleotide accession

PQ276738.1 [NCBI]

CDS location

range 40378 -> 43740
strand +

CDS

ATGACTACCAAGGTGATATTCACCTTCCATAGCCCGGACGGCAGCCCACAGGCGAACGAAAAGTTCACCGTGCGTCTCACTCGTCCGGGCATGAGCGACGTAGAGCACTGCGTCGTTATCCCCGAAACCTATGAGATGGTGACTGACTCCAACGGCGAGTTCACCATGGACCTGGAAGCGGCTACCTCCGCCTACCGAGTCACTGCTGTAGGCGGTGATGACGAGTACGAGGATGACCCCTGCTCGCAGTACACCTTCACCTTCTACGTACCTGTATCGGATGACCCGATCTACGTACAAGAACTGATCCTGATGCCTCCTCCCAACAACTTGCCATGGGACGAGGAAGCCATGAACAAGATCTCCCAAGCAGTGGTCGATGCTCGCAATGCACGAGATGATGCCGAAGAGTCTGCTGTCCATGCAGAAGCTCAGGTAGGTCTGGCTGCCGAGCAAGTGGAACTGGCGAAGTATCAAGTGGATCTTGCTAAGGCGGAAGTCGCCAAGGCATCTGATCAAGTAGATCTCGCCAAAGCCGAGGTAACCAAGGCAGCTGATCAGGTTGGTTTGGCCAAAGAAGAAGTTACTAAGGCAGCTGATCAGGTTGGTTTGGCCAAAGAAGAAGTTACTAAGGCAGCTGATCAGGTTGGTTTGGCCAAAGAAGAAGTTACTAAGGCAGCTGATCAGGCTGACCGCGCCAAGGCAGAAGCTGATCGTTCCTCCACTCAAGCTACTGCTGCGGCTGCCTCTGCTGCCCAAGCCAAGAACGAAGCTGATCGTTCTAAGACGGAAGCGGACCGTGCTCGGGAATTAGCGGATGGCGTCGCGGAGAAGGTAGAGGGTGGATCTCTCCCGCCTCTGGTGGGTATGAACGAAACCTTCACCTACGAGGGTACTGATCCCTACATGTGGGAATCCTCTGGTCCCATCTGGCGATCCTCTGAGGATGGCGTTCTCTTTGTGGCCAAAACTGATGGGAGCAATTCTCGGGCTTTCCTGCGTAAAGATGCTGAATTCCCCGCTGGTCATTGGATCGTCTACTTGCGTATCCGTACGCAGAACGGCCTGCCGGGCCAGAACCGGTGTGCTCAAATCCGTCTCATGGAAGAAGACAACAAAGAGTGCTCTCTCTACTTCAACCTCGGTACGGATAACGTTCCTACTCCGGGTGTGATCACCATGCAGTATGGCTATGAAGGTGCCAGTGACCGCACTGTAGCCAGCATGTTCTCTCCGGTGAACACTGAGCTTTGGATGGATCTGGCCATCAAGTACGATGCAGTCAACCGTCATGTTGAACTCTTCCGTCGCCTTCCCAATTCCACCTGGGAAAAAGGCGAAGGTCGTCTCATGGTGGATGCTCTCAAGCCTGTGGCTATCGAAGTATCCTCGTTCCCCGTTTCGCCAAAAGACTGGTGGCTGCACCTTGACTACATCTCGGTGTGTAAGCCGAACCTTATCTGCTACGGCGACAGCATCGCTGCTGGTCAGAACGAGTACGGTGTTACTCGTGGTACTGAGGACTACCACAGCCACCGCAACTGGGCTGGTACTTGGTTCGCCAAGGCTCCGTTGTACGCTACGAACCGGAACAACTTGGTTCTGGTACAGGGTGTGGAAGGCCGTCGTACCTGGCAATACCTGAGCCATCTGAGTGAGATCAGTGGTTCCGGCGTCAAGGTGGTCTTCCTGCATGCCAGCACGAATGACGTGTATGAACCCTCTATGACCCAGTCCAAGCGGACCTCGGATACCCAAGCCATCGTAGACCAGCTTCATGCTGTCGGTGCCCAGGTAGTCCTGTTCAACTCCATGCAGGGAACCAAGGCGTACAACGATGCCTCGACTGGTGCGGTCAAGCTTCGTGACTACACCGATACATGGTGGAGCACTGAGCTTCCCAAGGTCACTGGTTTGGCTCAGACTCTGGACATCGCACGCCTTCTCGCCAAGGACGGGTATATGGACCCCGTCCTTGCTGCTGATGATGGCTTGCACCTGACGGATGCCGCTGCTCAGAAGATCGCTGCCAAGTTGGGTCAGTTCTTCTCCAACTCCAGTGATACCAATGGTTTCGCTCCGTTGGATAGCCCTACCTTCACTGGCATTCCGACCGTTCCGACGCAGACTCCACTCCTGCCGTTCGGCAAGACCATTGCCAACACCGAGTACGTGGTCACTTTCCTCCAGGATTGGACCAGCCGGTATGGCTATGGCGAACTGTCTATGGCTAGCCATACTGGTGCTCAGCTGTCCGGTTCCGGTGTCCGCAGCGGCTACTACCATGTACCTGCTGGTTCGGGTAACCCTCTCCCAGGCGATCTGAGCAGTGCTCTGGCTTTCGTAGACCACAAGTCTTATGACACCAACAAGGGATGGCAGCTGTGGAATCCGGCCTACTCTGGCCGACTGTTCATCCGTACGACGAATGCTTCTGGTGTCTGGCAGACTCCGGTAGAACTGGCCACCTTCACTTGGTTGGATGCGAACAACGTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCGGTGTTCAATCCTACTGGTAGCCCCACTCTGTCTGGCTTCGTACCGATCCAGGACAGTGCGGATGGTGGCTGGCGTAACCTCTCTGCCACTCCTACTGGTGTGGCTCTGCTGGGTGCAGCTTCGGCAGGTGGAGCACTCAACTACATCGGTGGTATGCCCATCGCAAACCAGACTCTGCCCGACAACAACATCGATAACGCAGCCAGCAATGGCTTCCAAAGGGTTCCCAATGGAACCTCTGGGTTGCCTTTGAACATAGGCGACATCAATGGACACTCCGCCATTACTGCGGTGTTCGATGCCTCCATTAAGTACCAGCTGCTGTTCCCCCGCACTACTGGAGTAGAGTCTTACTCCAATTCTGTGTTCTATCGCGCACGGTTGGACAATGGATGGGAAAGTTGGGTTCGTCTTCTCGCCTCCAACCAGCTGGAAGGTAACGTAACCAACGACCTGCTCACCTCTGCTGTATTCCAGAGCAACGGTAACAACAGCCTCAACGTAGGTCGGTCTGTACGTTTGGCCAATGGTACTCAGATCGTCTCTGCTACCGTTCGGCTTACCTTTGCCTCTGAAGGTATTCTGAACTACATGTACACCTATCCTATGGGCTTTATCGAGCCGCCCGCTGTGATCGTGCAGCCCATTGAAGGTCCAGGAGCAGATATCAATGGAATGCCCATCTCTGCGGTTATGGGACCGTTCACGTATAACGTGGCGAATGGGAACGTTTTGATGCAGTGCTTCCGCGTTGTTGGTTATACTGACACTGCTTTTGCCAGCAACTCCTTCATCAACTGCTCTGTAGTAGCAATAGGACGGTGGAAATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)