Phage RBP Database

Genbank accession

YP_009886690.1 [GenBank]

Protein name

tail collar fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,94

Protein sequence

MATPLNNTYKHIADAAQYISFNPTGTSFPATVVDVQAALALTSPTTYATATTAGVVKIATKDEVLAGVDNTKMVTPFTLNERMKYPDATTTVKGLVTLATNAEAQAGAITTNKAINPASLKYTLDWWWNNKLASESAQGVIKLSTQQAAQAGVDDSTAMTPLKVKQAIAAATAQIPQPVQATETAPGIVQLATIGQAQQGTLRDGYAISPYTLQRITGSLTTRGLVQAASLSQANTGTDDTLYISAKGFKTYNATTTNYGTVKLTDTLGTTGAGVVLSSNAKVLSTVSTGTQTVTGIVNFTGSLQLQGQPVANQKFVKDSIPVGVMMEWLGDSAPPGGMWALCDGGAESKAARPELFAVIGYKFGGSGDTFYRPDMRGLYARGAGRGKDIIANTGYDEFNKPLLGNGVDGGVVGQVQKQQIREHKHIVPWGEIRRETPNFPFGGTELSKYFGHAGQEDHDNGWMFSNDGTEFEPASVRTQYSTVNSKELIGTETRPWSMSVNYIIKVA

Physico‐chemical properties

protein length:	508 AA
molecular weight:	53865,90370 Da
isoelectric point:	6,97718
aromaticity:	0,07874
hydropathy:	-0,22264

Domain architecture

YP_009886690.1

1 508 aa

ATT 311–379 · STR 380–507 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053 IPR044916

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083 IPR027448

IPR027448
RBD

IPR027448

YP_009886690.1

1508 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0176
STR

DC_0176

YP_009886690.1

1508 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	311	377	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	317	507	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	324	379	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	378	500	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	413	507	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits
IPR027448	RBD	DC_0877	425	507	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Proteins with similar domain architecture

Phage

Acinetobacter phage vB_AbaM_Kimel [NCBI] · taxon 2686303

Uroviricota Caudoviricetes Pantevenvirales Twarogvirinae Lazarusvirus

Host

Acinetobacter baumannii [NCBI] · taxon 470

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales

Genbank protein accession

YP_009886690.1 [NCBI]

Genbank nucleotide accession

NC_049492.1 [NCBI]

CDS location

range 95502 -> 97028
strand +

CDS

ATGGCGACACCACTTAATAATACATACAAACACATTGCAGATGCAGCACAATATATCTCATTCAATCCAACAGGCACAAGTTTTCCTGCAACTGTAGTAGATGTTCAAGCTGCATTGGCTCTTACTTCTCCTACTACATACGCCACTGCCACTACCGCAGGTGTTGTCAAAATTGCTACCAAAGATGAAGTTTTAGCAGGGGTTGATAACACAAAAATGGTGACACCATTCACTCTAAATGAGAGAATGAAATATCCTGATGCCACTACAACAGTTAAAGGGCTTGTAACTTTAGCTACTAATGCAGAGGCTCAAGCCGGAGCCATAACTACAAATAAAGCTATCAATCCAGCAAGTTTGAAATACACACTTGATTGGTGGTGGAACAATAAATTAGCATCTGAATCTGCACAAGGTGTTATTAAATTATCTACACAACAAGCCGCACAAGCCGGAGTAGATGATTCTACCGCAATGACACCATTAAAAGTCAAACAAGCCATTGCAGCTGCCACAGCACAAATTCCACAACCTGTACAAGCTACTGAGACTGCACCGGGTATAGTTCAACTTGCAACAATTGGACAAGCACAACAAGGTACTTTAAGAGATGGATATGCAATCTCGCCATATACTCTTCAACGTATTACAGGAAGTCTTACAACACGAGGATTAGTCCAAGCTGCATCTTTATCACAAGCTAACACAGGGACGGATGACACCTTATACATTTCTGCTAAAGGATTCAAAACATATAATGCTACCACTACAAATTATGGTACAGTTAAATTAACCGATACACTTGGGACCACCGGTGCTGGTGTCGTGTTAAGTTCTAATGCTAAAGTATTAAGCACTGTATCTACCGGTACACAAACTGTCACAGGCATTGTTAATTTTACTGGATCCCTTCAACTTCAAGGACAACCAGTAGCCAATCAAAAATTTGTTAAAGATTCTATTCCGGTTGGCGTCATGATGGAATGGCTCGGTGATTCAGCGCCTCCTGGAGGTATGTGGGCGTTATGCGACGGCGGAGCCGAATCAAAGGCTGCACGCCCAGAGCTTTTTGCGGTTATTGGCTATAAATTCGGCGGTTCTGGTGATACATTCTATCGCCCGGATATGAGAGGTCTTTATGCTCGTGGTGCTGGACGTGGTAAAGACATCATTGCAAACACCGGGTATGATGAGTTCAATAAACCTCTATTAGGTAATGGTGTAGATGGCGGTGTTGTTGGACAAGTTCAAAAGCAACAAATTCGTGAACATAAACACATTGTTCCTTGGGGCGAGATTCGTAGAGAGACACCTAACTTCCCATTTGGTGGCACAGAGTTAAGTAAATATTTTGGGCACGCTGGTCAGGAAGATCATGATAATGGTTGGATGTTCTCTAACGATGGAACAGAATTTGAACCTGCATCAGTGCGGACTCAATATTCTACTGTCAACTCTAAAGAGTTAATTGGAACGGAGACACGCCCATGGAGCATGTCAGTAAACTATATTATTAAGGTGGCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)