Phage RBP Database

UniProt accession

A0A6J7WHX8 [UniProt]

Protein name

Pectate lyase superfamily protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,98

Protein sequence

MQRYVNFIASTTSTSSTLMVLSNATCTVYVAGTTTAATLYSDNGITPLANPFLSSSTGQVAFYAANGLYDLVVSKIGYLTVTISDIELDDLLASSGSSGVGYIAAGTGAVATTVQTKLRESVSVKDFGAVGDGVADDTAAIQAAITSAQSNGGVVFFPRGKYRVTTGNISISGITLVGCGTPEFGNTYDDNSSVILLDSTTTTPFVLGLGWNISGLTFFYPNQDGTAATPIVYPPLFTGTYVAGGIMNNVTVVNAYQVFKFTSGTAVGDFRLDQCRMYGIDKVFWFLQGAPEVINVSNCMFSYGIYVPAATPNTYLRDYTSLNGEFMRIDVAASSHTSVDGFNLNQSLVFGYRYGIRVLSGNLSVSTINNNWFDGVSTALSVESPGFTAGTRWTGNYHYSYRVGFTNTSYPTMSFSASGGGGNLLVSNNDFLFSQGNHILWNAPSFSDIKITDNRFRNWGRDAASAPTSYYAINATDSTLNGIIGLNKFKPLSGAVAHNRNGIGIGNAADLAIVSNEFDDCYLPIWIIAATRVRILANTSTGSTSSAALKNDATAGVLQSSGNRWDKGVSGPSGAPSFSANAGTQTFTGAKTQATFTNAEPFDRDVNFASSTFTAPSTDDYEFNVQLNNTTGVTVGDVWTLSIEQAGGGSGVFARSVYITANSSVSSPLSCSATFSLTAGDTVIAYVTRISGTGNYVTINNAGYNTFTGKRLPY

Physico‐chemical properties

protein length:	714 AA
molecular weight:	75219,51340 Da
isoelectric point:	4,95871
aromaticity:	0,11485
hydropathy:	0,05210

Domain architecture

A0A6J7WHX8

1 714 aa

STR 86–545 · RBD 575–713 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334 IPR008983

IPR011050
STR

IPR011050

IPR024535
ENZ

IPR024535

A0A6J7WHX8

1714 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1435
ATT

DC_1435

A0A6J7WHX8

1714 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	86	429	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	120	545	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR024535	ENZ	DC_0410	122	181	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
IPR008983	RBD	IPR008983	575	713	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0A6J7WHX8

1 714 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	134	134	0,9833
Central domain	135	571	438	0,9946
C-terminal	572	714	142	0,9938

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch

Host No host information

No CDS data available.

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0016829	lyase activity	Molecular Function	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)