Protein

View in Explore
Genbank accession
QVW27328.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MALQSPGIETKETSVQSTVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGSPDNLTADYFMSAVNFLQYGNDLRVVRVVDKDAAKNASAIFNQIKTTIASQGSNYTVNDTIKVKYNSVVVEEKGKVSKVDSNGKILSVIIPSEKIVAHAKQIGTYPDISTGWTTEIVSQSSGVSALITIDGIESNSGITLLNLDIAKETIQGTAFQTLTQKYQLPSVVALYPGELGSTVQVEIISKAAYDSGAMISGYPSGVSVKNSGRSVMTYGPQTDNQYAFVVRRGGIVQESFIVSTEKTDKDIYGVNIFMDDFFANGGSQYVYGTSLNWPKGFSGILEFGGGLSSNDTVGADELMNGWDMFADREALHVPLLIAGACAGETVEIMSTVQKHVISIGDERQDCTVFVSPPRSLLVNIPLATAVDNMIEWRTGYKLSGGAAVDNNLNVSSSYGFLDGNYKYQYDKYNDVNRWVPLAGDIAGLCVYTDSVSQPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLFGDKTLTNVPSPFDRINVRRLFNMIKKDIGDNAKYKLFENNDDFTRSSFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVATIYVKPPRSINYITLNFVATSTGADFDELVGPQAV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 72388,63020 Da
isoelectric point:5,13850
aromaticity:0,09804
hydropathy:-0,15732

Domains

Domains [InterPro]
IPR054564
24–83
IPR054564 IPR054565 IPR035326 IPR035089 IPR020287
IPR052042
441–652
IPR052042
QVW27328.1
1 663
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage JC03
[NCBI] 		2831170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW27328.1 [NCBI]
Genbank nucleotide accession
MW767161 [NCBI]
CDS location
range 73676 -> 75667
strand -
CDS
ATGGCTTTACAATCTCCAGGTATTGAAACCAAAGAAACATCGGTACAATCTACCGTTGTTCGAAATTCAACTGGTCGCGCTGCCATTGTCGGTAAATTTTCATGGGGGCCAGCTTATCAGATCCGTCAGATTTCTAACGAAGTCGAACTGGTAAACTATTTTGGTTCCCCAGACAACTTGACCGCTGACTATTTCATGAGTGCTGTTAACTTCTTGCAGTACGGTAATGATCTCCGTGTGGTTCGCGTTGTCGATAAAGATGCCGCTAAAAACGCAAGCGCAATTTTTAACCAGATCAAAACAACTATCGCATCACAGGGTTCTAACTACACTGTGAACGATACTATTAAAGTAAAATACAACAGCGTTGTTGTAGAAGAAAAAGGTAAAGTGTCCAAAGTTGACAGTAACGGCAAGATCCTCTCGGTAATCATTCCAAGCGAAAAAATCGTTGCCCATGCTAAACAGATTGGTACTTACCCAGATATTTCTACTGGCTGGACTACCGAAATTGTTTCTCAGTCTTCCGGTGTTTCTGCGTTGATTACGATTGACGGCATCGAAAGCAATTCTGGGATCACTCTGTTGAACCTGGATATTGCAAAAGAAACAATTCAGGGAACCGCTTTCCAGACTCTTACCCAGAAATATCAGTTGCCGTCTGTTGTGGCTCTGTATCCTGGTGAACTGGGTTCAACTGTTCAGGTGGAGATTATCTCCAAAGCTGCTTACGATTCTGGCGCTATGATTTCCGGCTACCCTTCTGGGGTTTCCGTTAAGAACAGCGGTCGTTCTGTAATGACCTACGGGCCACAGACCGATAACCAGTACGCTTTTGTTGTGCGTCGTGGTGGTATTGTACAGGAATCCTTCATCGTGTCAACCGAGAAGACCGATAAAGATATCTATGGTGTCAACATCTTCATGGATGACTTTTTCGCGAACGGTGGCTCTCAGTACGTTTACGGTACTTCCCTGAACTGGCCTAAAGGCTTCTCCGGTATCCTGGAGTTCGGCGGTGGTTTGTCCTCAAACGATACTGTAGGCGCTGATGAACTGATGAATGGTTGGGATATGTTCGCTGATCGCGAAGCTCTGCATGTGCCTCTGTTGATTGCTGGTGCGTGTGCTGGCGAAACCGTAGAGATTATGTCTACCGTTCAGAAACATGTTATTTCAATCGGTGATGAACGTCAGGATTGTACCGTGTTTGTGTCGCCTCCGCGCTCACTTCTGGTGAATATCCCGCTGGCAACTGCGGTTGATAACATGATTGAATGGCGTACTGGCTATAAACTCAGTGGTGGTGCTGCTGTTGATAACAATCTGAACGTAAGTTCAAGCTATGGCTTCCTGGATGGTAACTATAAATATCAGTATGATAAATACAATGACGTGAACCGTTGGGTTCCGCTGGCAGGTGATATCGCTGGCCTGTGTGTTTACACTGATAGCGTTTCTCAACCGTGGATGTCTCCAGCAGGTTACAACCGTGGTCAGATCCGCAACTGTATCAAACTGGCTATCGAACCGCGCACAGCACATCGTGACGCAATGTATCAGGTTCAGATTAACCCGGTAACTGGTTTCGCGGGTGGTTCCGGCTTCGTTCTGTTCGGTGATAAAACACTGACTAACGTACCGAGTCCATTTGACCGTATCAACGTTCGTCGCTTGTTCAACATGATCAAGAAAGACATCGGTGATAACGCGAAATACAAACTGTTTGAAAACAACGACGATTTCACCCGTTCTTCGTTCCGTATGGATACAGGTCAGTACATGACTAATATTCGTGCGCTGGGTGGTTGCTACGATTACCGTGTAATCTGTGACACCACGAACAACACGCCGGACGTAATCGACCGTAACGAGTTTGTAGCAACGATCTACGTGAAACCGCCTCGTTCTATCAACTACATCACTCTGAACTTCGTAGCAACGTCTACGGGCGCAGATTTCGATGAACTGGTAGGGCCGCAAGCCGTATAA

Tertiary structure

PDB ID
413b8a59db3984605de4f629423f58552bcd4eb15abd2234cd96c1fb8bcb37a5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome analysis of a novel phage JC03 infecting Cronobacter sakazakii Jiang,J., Zhao,C., Li,Z. and Xu,C. 2024-11-20 — GenBank