Protein

View in Explore
Genbank accession
XYM49357.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDFTSSYGRPIQGVSQQPPQVRQDGQCTTQVNCIPSAVDGLKTRVSSQLISVLMDAIGVNDKVYFYRRDKDEAYVIIMHERGLPSIYTLDGDACNVTGDATYLELGQTPPMDRFAMTTVGDYTFIVNREVHVGVRADTAPAPLKQAIVTVGYCSYGRTYKLIINGTKTFEYKAPSGATATDIDKVDTTYVAGELFKKLQADATLTVQQDGPYLYVNMLDQSDFTIKSEDGAGGKDLMVTKGIVDKLSEVPAHAPDNTYVAIKADGTTEAAEFYLKVDGQREDGRANWVETSKAGTLMGFDKATMPHTLVRDRIDSNGVAQFIIAEGNWLDRAVGNDKSNPLPSFYNKDDPKPITSIGVFQNRLYVTSGENLITTRTDDYFDFFRFTAQKELDTDPIDIYSDTKTVNLIKSSAMIGGNLVLFADNSQFMLDGSVPQTKKTATLTVISEYECVSNIKPVSSGDNLFFPFTYGRFGGVREMFVDNTTGIKRARPVTDHVNQYIDGHIRHMAGSTNINTLFVSATGQPNKLYVYDWIWVGDEKMQSAWHEWTFPRDASIIGFEYINNKLYVVSNQNGKCILESFDMSNPPQYNLDFHIAMDRQYTMDFTWNDSLQRWDGTALKHIPIDLDKIEVILIDADNPLNNGNTINVDYDKDHNTLSTTYPLSSDNTRKVRTAVGELFEVVYEPTPPQLRDYKGNVSTIDEMILGSLYFNFDHVGHFKVEVDDIYGEKWVGDFNNRRMNAPNNIVGFAPLKDIVEEVPVRKLAKEIKYRIRTLTHIEMQLRVIEWTGISNPSKRRR
Physico‐chemical
properties
protein length:796 AA
molecular weight: 89529,70480 Da
isoelectric point:5,15333
aromaticity:0,10176
hydropathy:-0,39372

Domains

View on InterPro
Domain architecture
XYM49357.1
1 796 aa
TTP 4–793 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XYM49357.1
1 796 aa
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9907
Central domain 140 350 212 0,1191
C-terminal 351 796 445 0,2427
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage BD1 [NCBI] · taxon 3411689
Viruses
Host
Vibrio vulnificus [NCBI] · taxon 672
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
XYM49357.1 [NCBI]
Genbank nucleotide accession
PV244424 [NCBI]
CDS location
range 19126 -> 21516
strand -
CDS
ATGGACTTTACATCCTCCTATGGCAGACCTATTCAGGGTGTGTCACAACAGCCACCACAGGTAAGACAGGATGGACAGTGCACAACTCAGGTTAACTGTATCCCTTCTGCTGTGGATGGATTGAAGACCCGTGTTAGCTCACAGCTAATCTCGGTACTAATGGATGCAATCGGTGTGAATGATAAGGTGTACTTCTATCGTCGAGATAAGGATGAAGCCTATGTAATCATCATGCATGAGCGTGGGCTACCTAGTATCTACACACTAGATGGCGATGCCTGCAATGTGACGGGTGATGCAACCTATCTTGAGTTAGGGCAGACACCACCTATGGACCGATTTGCTATGACAACGGTTGGTGACTATACCTTCATTGTGAATCGTGAGGTTCATGTTGGTGTACGTGCTGACACAGCGCCAGCCCCATTGAAGCAAGCCATCGTAACTGTAGGCTACTGTTCCTATGGTAGAACCTATAAGCTTATCATCAATGGGACGAAGACCTTTGAATACAAGGCACCTTCAGGCGCTACTGCTACTGACATCGATAAGGTTGATACAACCTATGTTGCTGGTGAGTTGTTCAAGAAGCTACAGGCAGATGCGACACTAACTGTCCAACAGGATGGACCTTACCTTTACGTTAACATGCTGGACCAATCGGACTTCACTATTAAGTCGGAAGATGGTGCAGGTGGTAAGGACCTTATGGTAACTAAAGGTATCGTGGATAAGCTGTCTGAAGTTCCAGCTCATGCACCAGATAATACCTATGTTGCTATCAAGGCTGATGGTACTACTGAGGCTGCTGAGTTCTACCTTAAGGTGGATGGTCAACGTGAAGACGGACGAGCCAATTGGGTGGAGACATCCAAGGCAGGTACGCTAATGGGATTTGATAAGGCAACCATGCCTCATACGCTAGTGCGTGATAGAATCGATTCCAATGGTGTAGCTCAGTTTATTATAGCTGAAGGCAACTGGCTTGACCGTGCTGTTGGTAATGACAAGAGTAACCCTCTTCCATCGTTCTATAATAAGGATGACCCTAAGCCAATCACATCAATCGGTGTGTTCCAGAACCGACTCTATGTTACATCGGGTGAGAACCTGATTACTACCAGAACAGATGACTACTTTGACTTCTTCAGATTCACTGCTCAGAAAGAACTAGATACCGACCCTATCGATATTTACTCTGATACTAAGACAGTGAACCTGATTAAGTCCAGTGCAATGATTGGTGGTAACTTGGTATTGTTTGCTGACAACTCGCAGTTCATGCTAGATGGTTCAGTACCTCAAACCAAGAAGACAGCAACACTTACTGTTATCAGTGAGTACGAATGTGTGTCTAACATCAAGCCTGTATCTTCAGGTGATAACTTGTTCTTCCCATTTACCTATGGTCGCTTCGGTGGTGTTCGTGAGATGTTTGTTGATAACACAACAGGTATCAAACGTGCACGTCCAGTGACAGACCATGTTAACCAGTACATCGACGGGCATATTAGGCACATGGCTGGCTCTACCAATATCAACACGTTATTCGTGTCTGCAACTGGTCAGCCTAATAAGCTCTATGTTTATGACTGGATTTGGGTAGGTGATGAGAAGATGCAGTCTGCATGGCATGAGTGGACTTTCCCAAGAGATGCATCCATTATCGGGTTTGAGTACATCAACAACAAACTCTATGTTGTGAGTAACCAGAACGGTAAATGTATCCTTGAGTCCTTCGACATGTCAAACCCTCCACAGTACAACCTAGACTTCCACATCGCAATGGACCGTCAATATACGATGGACTTCACGTGGAATGATAGCTTGCAACGGTGGGACGGTACTGCATTGAAGCATATCCCAATCGACCTAGATAAGATTGAAGTTATCTTAATCGATGCGGATAACCCACTGAACAACGGAAATACAATCAATGTTGACTATGACAAGGACCACAACACATTGTCAACTACCTATCCCTTATCTAGTGACAACACTCGTAAGGTACGGACTGCCGTTGGTGAGCTGTTCGAAGTGGTGTATGAACCTACACCACCACAATTGAGAGACTACAAAGGAAATGTGTCTACCATTGATGAAATGATTCTAGGTTCACTATACTTTAACTTTGACCACGTTGGTCACTTCAAGGTAGAGGTCGATGACATCTACGGAGAGAAATGGGTTGGAGACTTCAACAATAGACGAATGAATGCACCTAACAACATTGTAGGCTTTGCACCATTGAAAGACATTGTGGAAGAAGTTCCAGTCCGTAAGCTGGCCAAGGAAATCAAGTATCGTATTCGGACCCTAACACACATCGAAATGCAATTACGTGTTATCGAGTGGACAGGGATTAGTAACCCTAGCAAGCGGAGAAGATGA

Genome Context

Tertiary structure

XYM49357.1
ColabFold structure
Source ColabFold
pLDDT 87.5
Oligomeric state monomer
Download structure