Phage RBP Database

UniProt accession

L0LBQ5 [UniProt]

Protein name

Tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,81

Protein sequence

MADNEFGNFLNPLEPMRFQSTLGAERERRYKEGDKVVKLSLARVTKVNYKYNTVDVTTTIYKNTTGGNPNDNGKFSARLPVAFGGTTPDGNVYGSNTLMTVGSLVLIGYLEGSKDQPIVLNIYGDTDNQSQLTRTTFSSADESQEAIQQELWQLFTLYPSMTYRNIDGHGNQEVTFSGKSFLYITDSDPDNSYVQDGGFDYDDLPSSRYANGELIEPKSAASPTVLYVHQGIYESHRVTFFIKADGTVRMGSRHKEGTGITFMEMTTDGTFHIVQNKGTTDPEGDPEKFSKIGINDDGDVIMKSREHELTVNSKGVYINGKPISSWGGGEPGENPLEDIINDLNNIKTEITVVNGKIDMKVSREELDVDLEEVERKSKELYDGAKKEIDDLNDVIKNLDDYIEGAFQDGIIDQAEAKVIESYINNLRTEKIDLDAKYEEMISNEYLPTEQHDFLEVAKGAYDSKFAELIDIINAAIQDGKITDEDRQAVNGAFQDYRTAIANLSAAFQKAADAIALSMAKEAENASRRYTEAQFTILDNEIKSRVKSEEFTKAVSDVNTKIADVEKKATEDIQNTNDRVTEVEKKVPYKAEIFSTNGLVFKDGLINTTIFCKVFRGDQEITDSIDASRFKWTRVSDDAAEDMNWNSANAVGKKSIVITAADVRARATFNCEIQDQ

Physico‐chemical properties

protein length:	675 AA
molecular weight:	75253,45860 Da
isoelectric point:	4,63661
aromaticity:	0,08444
hydropathy:	-0,58311

Domain architecture

L0LBQ5

1 675 aa

STR 587–675

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil Coil IPR007110

L0LBQ5

1675 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0209
STR

DC_0209

L0LBQ5

1675 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	381	401	Coils	Coil	-	-	-	-
Coil	Unmapped	-	423	443	Coils	Coil	-	-	-	-
Coil	Unmapped	-	565	585	Coils	Coil	-	-	-	-
IPR007110	STR	DC_0008	587	675	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

L0LBQ5

1 675 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	120	120	0,7722
Central domain	121	664	545	0,2958
C-terminal	665	675	10	0,0661

Note: Constraints were applied during segmentation.
Fixed 28 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage phiAGATE [NCBI] · taxon 1204533

Uroviricota Caudoviricetes Herelleviridae Agatevirus Agatevirus agate

Host

Bacillus pumilus [NCBI] · taxon 1408

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

AGB62590.1 [NCBI]

Genbank nucleotide accession

JX238501 [NCBI]

CDS location

range 95937 -> 97964
strand -

CDS

ATGGCAGATAACGAATTTGGAAACTTTTTAAACCCGTTAGAGCCTATGAGGTTCCAGTCTACACTAGGAGCTGAACGGGAGCGTAGATACAAAGAAGGAGACAAAGTTGTTAAACTATCCCTCGCTCGAGTAACGAAAGTTAACTACAAATATAATACAGTAGACGTTACTACAACAATCTACAAGAACACGACCGGAGGAAACCCTAACGACAACGGAAAGTTCTCAGCACGACTACCTGTAGCTTTTGGAGGTACAACTCCTGACGGGAACGTATACGGAAGTAACACACTAATGACTGTAGGATCACTTGTCTTAATAGGTTACCTCGAAGGCAGCAAGGATCAGCCTATCGTTCTAAATATTTACGGAGATACAGATAACCAATCTCAGCTCACAAGAACAACATTTTCTAGCGCTGATGAGTCTCAGGAGGCTATCCAACAAGAGCTGTGGCAGCTATTCACTTTATATCCTTCTATGACTTATAGAAACATTGACGGACATGGAAACCAAGAAGTAACCTTCTCAGGCAAGTCATTTTTATACATAACTGACTCTGATCCTGACAACTCCTATGTGCAGGACGGAGGGTTTGACTATGACGATCTCCCTAGTTCCCGCTACGCTAATGGCGAGTTAATAGAGCCAAAGTCAGCTGCTTCTCCGACTGTGTTGTATGTCCACCAAGGCATTTACGAGAGCCATAGGGTAACATTCTTCATTAAGGCAGACGGTACGGTTAGAATGGGCAGCAGGCACAAAGAAGGGACCGGAATCACCTTCATGGAGATGACTACGGATGGTACATTTCACATTGTCCAAAACAAAGGGACTACTGACCCTGAAGGTGATCCGGAGAAGTTTTCTAAGATTGGCATAAATGATGACGGAGACGTAATCATGAAGTCAAGAGAACATGAGCTTACAGTCAACAGCAAAGGTGTTTACATAAATGGAAAACCGATATCCTCTTGGGGCGGAGGGGAACCCGGGGAAAACCCACTAGAGGACATTATTAACGACCTCAACAACATAAAAACAGAAATTACAGTCGTTAATGGTAAAATAGATATGAAGGTAAGTAGAGAAGAGCTAGACGTTGATCTTGAAGAAGTCGAGAGGAAATCAAAGGAACTCTATGACGGAGCCAAGAAAGAAATTGATGACCTTAACGATGTTATAAAGAATCTTGACGACTACATCGAAGGAGCTTTCCAAGACGGAATTATTGACCAAGCTGAAGCCAAGGTCATTGAATCATACATAAACAACCTTAGAACTGAGAAGATTGATCTTGACGCAAAGTACGAAGAAATGATTAGTAACGAGTACTTGCCTACGGAGCAACATGACTTTTTAGAAGTTGCCAAAGGCGCCTATGATAGCAAATTCGCTGAGCTTATAGACATCATTAACGCTGCAATACAGGACGGAAAGATAACCGATGAAGACCGTCAAGCAGTTAACGGAGCTTTCCAAGACTACAGAACAGCTATTGCTAACCTCTCTGCGGCGTTTCAAAAGGCAGCAGATGCAATAGCACTATCCATGGCTAAAGAAGCTGAGAACGCATCTAGGAGGTATACAGAGGCACAGTTTACTATTCTCGATAATGAGATCAAGAGTCGTGTCAAATCAGAGGAGTTTACTAAAGCTGTCTCAGACGTTAACACGAAAATCGCAGACGTTGAGAAAAAGGCAACGGAAGACATTCAAAATACTAATGATCGAGTAACAGAGGTCGAAAAGAAGGTACCTTATAAGGCAGAGATTTTCAGTACAAACGGACTCGTGTTTAAGGATGGGCTGATTAATACAACTATCTTCTGTAAAGTGTTTAGAGGAGACCAAGAGATCACAGACTCAATTGATGCTAGTCGTTTTAAATGGACCAGAGTATCAGACGATGCCGCTGAGGATATGAATTGGAATAGCGCAAATGCTGTCGGGAAGAAATCCATAGTAATCACCGCAGCCGATGTAAGGGCTCGTGCTACGTTTAACTGTGAGATTCAAGATCAATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)