Protein

View in Explore
Genbank accession
QBX23857.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MFRKIANGKVTFLPLTTTVNGQLLEDVLKSDSASFKTIRIEGRHAGEYNHQVTEVLGRHGAYYHQKTKDSLPLTWTVYLKASDVSSFGQLASNLHALLVKSKVTKFEFSDDDGCYYLGQLKKFPDLKEKRCEAIIEIEIICYDPYKFKDIKSFKGNVINYKGQVTTKPIVTLNLSSPTKEIRLLHVESQKYIRLTGTYTTDEIKIDMATGKITQNGRNILSDLDMVNSRYFELLPGKNTLQCDNATITADFREVYL
Physico‐chemical
properties
protein length:256 AA
molecular weight: 29126,05320 Da
isoelectric point:8,82961
aromaticity:0,09766
hydropathy:-0,35625

Domains

Domains [InterPro]
G3DSA:2.40.30.200
2–147
G3DSA:2.40.30.200 G3DSA:2.60.120.860
IPR006520
34–147
IPR006520 IPR054738
IPR008841
51–130
IPR008841
QBX23857.1
1 256
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan164
[NCBI] 		2548016 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23857.1 [NCBI]
Genbank nucleotide accession
MK448857.1 [NCBI]
CDS location
range 25336 -> 26106
strand +
CDS
ATGTTTAGAAAAATAGCCAATGGCAAAGTCACGTTTTTACCGCTGACAACAACAGTCAATGGCCAATTGCTTGAAGATGTTTTAAAAAGCGACTCTGCCTCTTTTAAAACAATCAGAATTGAGGGAAGGCATGCGGGTGAATACAATCATCAAGTTACAGAGGTTTTAGGGAGACATGGTGCTTATTATCATCAAAAAACCAAGGATAGCTTACCGCTTACTTGGACAGTCTATCTAAAGGCGAGTGACGTTAGTAGCTTTGGACAGCTAGCTAGTAATCTACATGCGTTGCTGGTCAAATCAAAAGTTACAAAATTTGAATTTAGTGATGATGATGGTTGTTACTATTTAGGTCAATTAAAAAAATTTCCGGACCTCAAGGAAAAGCGTTGCGAAGCTATTATCGAGATAGAAATTATCTGTTACGATCCTTACAAATTTAAAGACATCAAATCTTTTAAAGGCAACGTGATTAATTACAAAGGACAAGTAACAACTAAACCAATCGTGACTCTTAACCTCTCATCACCAACAAAAGAAATTAGGTTGCTACACGTCGAAAGTCAAAAGTATATCAGACTAACTGGTACTTATACGACCGATGAGATTAAGATTGATATGGCAACGGGTAAGATTACCCAGAACGGTCGCAACATCTTGAGTGATTTGGATATGGTTAATAGCCGTTATTTTGAGCTACTACCTGGAAAAAACACTTTACAGTGTGACAATGCCACAATTACAGCTGATTTTAGGGAGGTCTATCTATGA

Tertiary structure

PDB ID
deec8af9ba2ff329b409aa7025604613fab8c3bf192e33e4e9109ef696941c58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9562
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank