Protein

View in Explore
Genbank accession
AJD82793.1 [GenBank]
Protein name
tail component protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MTTLLLHKDAFRPSASTEKKSLRAGVRISTLLRQEMYISGRGKSLTRRVPFVVVRNGQPVLQAQWSGRIKKGDNLSIVHLPKGGGGGSNPMQIVMTVAIAVAAAYTGGAVGAAYGVGWGAAASAAVMIGGTLLLNMFFPPETPSPMDMNREKASPTYSLTAQGNTARLLEAIPVLYGRFRTFPDLASSPYSETVGNEQYLYQLFCITQGSMEIEKLQVDKDDFATYGEIQYQVVNPGEKVTLFPDNVITSIAVSGQEMTAQQMFGPFAVSAPGVEVNHIAVDLSWPGGAYYMNDQGKFNSSTVQVQFEYQKIDDNGNALGQWEILVEKGYTFSTSTPQSVTEKVAVALGRYQVRGIRTTPANSDNKEQNKTTWTALRGYAQSHHDYGDVTLLAVIMKATNNLNQSTSRQINVIGTRKLPVWDPVNGWSLTPQPTKNPAWAAADILRNPTYGRRLPTSRINIQELYRLSQVYDSRGDEFNGVFDSTSQLWDALSKVLRVGRTVPVNYAGLVDFVRNEPKTVPTFIFQPQNMVENTFSTDYMFVDTNSTPNYVQIEYTDGNTWDVATVDCILPGTAPTVPSKVSMMGITNRAQAWREGMSMAASNRDQRRMISFTTGREGYLPRYGDLVQISHDVPQWGQSGEVLGFNPGPDDPEWGLHGELVSNEPFEFAEGSNHAIVFKKRDGSPHGPFTVVPHPDGDAKKVIVQGTSAALEEIYISDGFREELTQYQFGPTERRGIRAIALSSTPDSSGRVALTFTNYADSVHSAENGGVVPPPGPESGLPGMNPVPIVSSVTVELTPFAWQQNIVATPARGATSYEFEISQDGVSWSNLGIQSTSSMQVNLPGGVWFVRVRGIGVAIGPWASWTGMIEASALPVSQIDHVSITSQVFGINLEWAVREDDFLAESVEIYWGTTNILGNASKLIQLPLPANKFAVTDLGPGQKRYFWFRVIDEAGRVGPWYNAGVGLLGSSSDQADIIMEYLDGKITETQLAQALIAKIESGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNEGVLESQVLVLADRFAVGRSDDETGTFKSMFIIDNGNVYMDTAFIKNGTITNLMIGDIIQSNDFVSGVSGWRLHKGAQGLEMNGTGNGYRVRLTNTGLYVWNTNTGVLCVEVGLLT
Physico‐chemical
properties
protein length:1160 AA
molecular weight: 126004,49230 Da
isoelectric point:5,25371
aromaticity:0,09052
hydropathy:-0,18302

Domains

View on InterPro
Domain architecture
AJD82793.1
1 1160 aa
ATT 274–379 · ATT 487–634 · RBD 1008–1130 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AJD82793.1
1 1160 aa
Domain Start End Length (AA) Confidence
N-terminal 1 641 641 0,8096
Central domain 642 1104 464 0,0564
C-terminal 1105 1160 55 0,7545
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Achromobacter phage JWX [NCBI] · taxon 1589746
Uroviricota Caudoviricetes Steinhofvirus
Host
Achromobacter xylosoxidans [NCBI] · taxon 85698
cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Coding sequence (CDS)

Genbank protein accession
AJD82793.1 [NCBI]
Genbank nucleotide accession
KP202969 [NCBI]
CDS location
range 20228 -> 23710
strand +
CDS
ATGACGACGCTCCTGCTGCATAAGGACGCCTTCCGCCCCTCGGCAAGCACAGAAAAGAAGAGCTTGCGAGCTGGGGTGCGTATCAGCACCTTGCTCCGGCAAGAGATGTATATCTCTGGCCGAGGCAAGTCCCTCACCCGCCGAGTGCCGTTTGTCGTGGTTCGGAATGGTCAGCCTGTGCTTCAAGCTCAATGGTCGGGCCGAATCAAGAAGGGGGACAACCTGTCGATCGTGCACTTGCCTAAGGGCGGTGGCGGTGGCAGTAACCCCATGCAGATCGTCATGACCGTGGCCATCGCTGTCGCCGCCGCCTATACGGGTGGCGCTGTTGGTGCAGCATACGGGGTTGGCTGGGGCGCTGCGGCTTCCGCTGCCGTCATGATTGGTGGCACCCTGCTCTTGAACATGTTCTTCCCGCCGGAGACGCCGTCGCCGATGGATATGAACAGGGAAAAGGCAAGCCCCACCTATTCCTTGACAGCACAGGGCAATACCGCGCGGCTGCTCGAGGCCATACCAGTGTTGTATGGCCGCTTTCGCACGTTCCCAGACTTGGCATCGTCGCCGTACAGCGAGACTGTTGGCAATGAGCAGTACTTGTACCAGCTCTTCTGCATCACGCAGGGCAGCATGGAAATTGAGAAGCTCCAAGTCGATAAGGACGACTTCGCCACGTATGGTGAGATTCAGTACCAGGTTGTGAATCCTGGTGAGAAGGTCACTCTGTTCCCAGACAATGTTATCACCAGCATTGCAGTCAGTGGCCAAGAGATGACCGCCCAACAAATGTTTGGTCCTTTTGCGGTCAGTGCACCCGGCGTTGAAGTCAACCACATTGCTGTCGACTTGTCGTGGCCGGGTGGTGCCTATTACATGAATGACCAGGGCAAGTTCAACTCGTCCACGGTCCAAGTGCAGTTTGAGTACCAGAAGATCGACGATAACGGGAACGCTCTCGGCCAATGGGAAATCCTCGTTGAGAAGGGCTATACCTTCTCGACCAGCACGCCCCAAAGTGTCACGGAAAAAGTTGCCGTGGCTCTCGGTCGCTACCAGGTGCGAGGCATCCGTACTACGCCGGCAAACTCGGATAACAAGGAGCAGAACAAGACAACTTGGACTGCTCTGCGTGGCTATGCCCAGTCACATCATGACTATGGTGACGTCACTTTGCTCGCGGTCATTATGAAGGCCACTAACAACCTGAACCAATCGACGTCGCGCCAGATCAACGTCATAGGTACGCGCAAGCTGCCAGTTTGGGACCCAGTCAACGGCTGGTCGCTGACCCCTCAGCCTACCAAAAACCCTGCTTGGGCTGCCGCGGATATTCTGCGTAACCCAACGTACGGTCGTCGGCTGCCGACGTCGCGTATCAACATCCAAGAGCTGTACCGCCTGTCACAGGTGTACGATTCGCGCGGTGACGAGTTCAACGGGGTCTTTGACTCCACGAGCCAATTGTGGGATGCACTGTCGAAGGTGTTGCGCGTGGGTCGGACTGTACCAGTCAACTACGCGGGCCTTGTCGACTTCGTACGCAACGAGCCCAAGACAGTGCCTACGTTCATCTTCCAGCCGCAGAACATGGTGGAGAACACGTTCAGCACTGATTACATGTTCGTGGATACCAATTCGACGCCCAACTATGTGCAGATCGAGTACACCGATGGCAATACGTGGGACGTGGCCACTGTGGACTGCATCCTGCCTGGTACTGCCCCGACTGTGCCGTCCAAAGTATCCATGATGGGTATTACCAATCGCGCGCAGGCTTGGCGCGAAGGCATGTCCATGGCCGCTTCCAACCGCGATCAGCGCCGGATGATTTCCTTCACGACTGGTCGCGAAGGGTATCTGCCACGCTATGGCGACCTGGTACAAATCTCACACGATGTTCCACAATGGGGCCAGTCAGGTGAAGTGCTGGGCTTTAACCCTGGTCCTGACGATCCTGAATGGGGTCTGCATGGCGAGCTGGTGTCCAATGAGCCCTTTGAGTTTGCAGAAGGGTCGAACCACGCCATAGTCTTCAAGAAGCGGGACGGATCGCCTCATGGGCCCTTTACGGTTGTGCCACATCCAGATGGCGATGCCAAGAAGGTTATCGTGCAGGGCACGTCTGCTGCTCTTGAGGAGATATACATTTCGGACGGTTTTCGTGAAGAGCTGACGCAGTATCAGTTCGGTCCTACCGAACGTCGTGGCATACGCGCAATCGCGTTGTCGTCTACTCCGGATTCGTCCGGTCGCGTCGCACTCACCTTCACGAACTACGCGGACAGTGTGCACTCCGCAGAAAACGGGGGCGTGGTGCCACCACCAGGGCCAGAATCTGGTTTGCCAGGCATGAACCCAGTGCCAATTGTCAGCTCCGTCACGGTTGAGCTGACGCCCTTTGCATGGCAGCAGAACATTGTGGCAACGCCAGCTCGTGGGGCTACGTCCTATGAGTTTGAGATCAGCCAGGACGGTGTCAGCTGGTCCAATTTGGGCATTCAATCGACCAGCTCTATGCAGGTTAACCTGCCTGGTGGTGTTTGGTTTGTCCGAGTGCGTGGTATCGGCGTAGCGATCGGTCCTTGGGCTTCTTGGACGGGCATGATCGAGGCATCGGCGCTGCCAGTGTCCCAGATCGACCACGTTAGCATCACTTCGCAGGTTTTTGGTATCAACCTCGAGTGGGCTGTGCGTGAAGACGACTTCCTGGCCGAGTCCGTGGAAATTTACTGGGGCACAACGAACATTCTGGGCAATGCTTCTAAGCTAATCCAGTTGCCGTTGCCAGCCAATAAGTTCGCTGTAACAGACCTCGGGCCGGGCCAGAAGCGGTATTTCTGGTTCCGGGTTATCGACGAAGCCGGCCGTGTTGGTCCTTGGTATAACGCCGGTGTCGGTTTGCTGGGCTCTTCGAGCGATCAGGCCGATATCATCATGGAGTACCTTGATGGTAAAATAACGGAAACGCAGCTCGCGCAAGCCCTCATTGCCAAGATCGAATCTGGGGGCGGTGCCGCCGTCGAGGTTGAGGCAATTCAGAACGCCTTGGCTGCAATGTATACCATCAAGACCCAGCTCACCGCAGGTGGCCGCACGGCTCTCGCCGGTATTGGTGTCGGGGTGGAAAACAACGAAGGCGTGCTCGAGTCCCAAGTCCTCGTTTTGGCAGACCGTTTTGCGGTGGGTCGTTCTGACGATGAGACTGGCACCTTCAAATCTATGTTCATCATTGACAATGGCAATGTGTACATGGATACGGCCTTCATCAAGAATGGCACTATTACCAACTTGATGATTGGCGATATCATCCAGTCCAATGACTTCGTGTCGGGTGTGTCTGGCTGGCGTCTCCACAAGGGCGCTCAAGGGCTCGAGATGAACGGCACCGGCAACGGGTACCGCGTCCGACTAACCAACACCGGCTTGTATGTGTGGAACACCAACACCGGTGTACTTTGCGTAGAAGTGGGGCTTTTGACTTAA

Genome Context

Tertiary structure

AJD82793.1
ColabFold structure
Source ColabFold
pLDDT 28.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization and genome comparisons of three Achromobacter phages of the Siphoviridae family Dreiseikelmann,B., Bunk,B., Rohde,M. and Wittmann,J. 2017-03-29 — GenBank