Protein

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Genbank accession
NP_835666.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,45
Protein sequence
MPYYFEFKVRELDLEPVSVTLSPAPSWVSVYKYNTQPFDQFYGTYDITVFLVANPPPGTPDGTYSIGLTLSDALGGITTHSVNFIINTSGTITFDPVSVPGLWGWWQPGNWLTQSSDTFNDVAIWYDASPGAHHLTLDRRITILPWNSTDAGSAYVGSYIKTLSDNSLLFSWSHVNHQFANMNYSSGADNYKPENVLITKDTSFYSNQYSIFFVYRNHLDWFSHRITGMRLTINHYEYWATNIWDFDVERGNNHLAMPVYSPVVINRAAPYTTVSYGSYWNDDYNHGFVGGWFIAFCLPPYAANPSARDAYYYDDGGGLTTMSVFNYAPGYYQNNVPHQPYITIFKVNKYASQTDGSLGIHPIKLFYYTNEEYASMSLIERNNRFSRFVFTKDQWNAVGYIVEENPLISNSVVIGYSYTYSIYFNETTSVTKSLEVTFYDINGNFRPPTTYAYIDGSDNQQAYIDVYGGFGIGTRFATAQSQYYANTGTIGWRTYNFTPGVFSLSFKECLFYTRALWNEAPQIMDYLMKKHGIPFVS
Physico‐chemical
properties
protein length:537 AA
molecular weight: 61326,40380 Da
isoelectric point:5,22768
aromaticity:0,18436
hydropathy:-0,27430

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
NP_835666.1
1 537 aa
Domain Start End Length (AA) Confidence
N-terminal 1 104 104 0,8609
Central domain 105 404 301 0,9316
C-terminal 405 537 132 0,3769
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Rhodothermus phage RM378 [NCBI] · taxon 148943
No lineage information
Host
Rhodothermus marinus [NCBI] · taxon 29549
cellular organisms Bacteria Pseudomonadati FCB group Bacteroidota/Chlorobiota group Rhodothermota

Coding sequence (CDS)

Genbank protein accession
NP_835666.1 [NCBI]
Genbank nucleotide accession
NC_004735 [NCBI]
CDS location
range 67567 -> 69180
strand +
CDS
ATGCCTTATTATTTCGAGTTTAAAGTTAGAGAACTGGATCTTGAACCGGTAAGTGTAACGCTCTCTCCGGCTCCAAGTTGGGTTTCGGTTTATAAATACAACACCCAGCCTTTTGACCAATTTTACGGAACTTATGACATTACAGTGTTTCTGGTAGCAAACCCACCCCCGGGAACACCGGATGGTACCTATTCGATAGGGCTTACTTTGAGCGACGCGCTGGGCGGAATAACCACACATTCAGTCAATTTCATAATCAACACTTCTGGAACCATTACATTTGATCCTGTTTCGGTGCCGGGGCTCTGGGGTTGGTGGCAACCCGGAAACTGGCTTACTCAGAGCAGTGATACTTTCAATGATGTGGCTATATGGTATGACGCTTCTCCGGGGGCACATCATCTTACACTTGATAGGAGAATTACTATTTTACCATGGAATAGTACAGATGCTGGAAGTGCTTATGTCGGATCTTACATAAAAACACTTTCGGATAATTCACTTCTGTTTTCATGGAGCCATGTCAATCACCAATTTGCCAATATGAATTATTCGTCGGGGGCTGATAACTACAAACCCGAAAATGTTTTGATTACAAAAGATACTTCTTTTTACTCCAATCAGTACTCTATTTTCTTTGTTTATAGAAATCATCTCGACTGGTTTTCTCATCGTATAACCGGAATGAGATTAACTATAAATCACTATGAATACTGGGCAACCAATATATGGGACTTTGATGTTGAACGGGGTAATAATCATCTTGCAATGCCGGTCTATTCCCCGGTGGTGATTAACAGAGCGGCGCCTTATACAACCGTCTCTTATGGATCATACTGGAATGACGATTATAATCACGGGTTTGTCGGCGGCTGGTTTATTGCGTTCTGTCTTCCTCCCTATGCCGCTAATCCGTCAGCCAGAGACGCTTATTACTATGATGACGGGGGCGGACTTACCACCATGAGCGTATTCAACTATGCCCCCGGCTATTACCAGAATAATGTTCCGCATCAACCTTATATTACCATATTCAAAGTTAATAAATATGCTTCTCAAACAGATGGGTCTCTCGGTATTCACCCTATTAAATTGTTTTATTACACCAATGAAGAATATGCGTCTATGTCGCTAATTGAAAGAAACAACAGGTTCAGCAGATTTGTCTTTACTAAAGATCAGTGGAATGCTGTTGGATATATTGTTGAGGAAAATCCCCTTATTTCCAACAGCGTTGTTATCGGTTATTCCTACACTTACAGCATTTATTTCAACGAAACAACTTCCGTTACAAAATCTCTGGAAGTAACATTTTATGACATAAATGGCAATTTCAGACCCCCGACAACTTATGCTTATATTGACGGTTCAGACAACCAGCAGGCATATATAGACGTATATGGTGGGTTTGGCATAGGAACACGTTTTGCGACAGCTCAGAGTCAATATTATGCCAACACCGGTACTATAGGATGGAGAACTTATAACTTTACACCCGGGGTGTTTTCTCTCTCTTTCAAGGAATGTCTGTTTTATACCCGCGCATTATGGAACGAAGCGCCCCAGATCATGGATTATCTTATGAAAAAACACGGTATCCCGTTTGTAAGCTGA

Genome Context

Tertiary structure

NP_835666.1
ESMFold structure
Source ESMFold
pLDDT 51.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Bacteriophage rm 378 of a thermophilic host organism Hjorleifsdottir,S., Hreggvidsson,G.O., Fridjonsson,O.H., Aevarsson,A. and Kristjansson,J.K. 2013-12-07 — GenBank