Protein

View in Explore
Genbank accession
XKC23868.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MGLETATYINGLVITNPDGNDGKSQGDDHLRLVKKVLKNTFPNITGAVTATQDDLNKTAIVGNFCFPGMIVAWSGAIGSIPAGWKICNGIGTISTGAPVPDLRGKFLWGSDGTTPNPIGFVSGTANINLSGTVSNTALTVAQMPAHNHIQGYGRNQTTSVTRYGFVETGISTVEDGFGFQSMSLAPLTSTTGQGEPHNHTFTVNAPLANMPPFYTVAYLIKN
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23289,96750 Da
isoelectric point:6,49149
aromaticity:0,08108
hydropathy:-0,06892

Domains

View on InterPro
Domain architecture
XKC23868.1
1 222 aa
STR 63–221 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage JB8 [NCBI] · taxon 3374763
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pseudomonas sp. [NCBI] · taxon 306
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Coding sequence (CDS)

Genbank protein accession
XKC23868.1 [NCBI]
Genbank nucleotide accession
PQ473534.1 [NCBI]
CDS location
range 11315 -> 11983
strand +
CDS
ATGGGTCTTGAGACAGCAACCTATATTAATGGGTTGGTGATTACGAACCCGGATGGTAATGATGGGAAGAGCCAAGGGGATGACCACCTGAGGCTCGTTAAGAAGGTTCTCAAGAATACCTTCCCGAATATCACCGGAGCTGTTACCGCCACCCAAGACGACCTCAACAAGACCGCCATTGTAGGTAACTTCTGTTTCCCCGGAATGATCGTAGCTTGGTCTGGAGCCATTGGCTCTATCCCAGCGGGGTGGAAGATTTGCAATGGCATTGGGACTATCTCCACAGGGGCGCCCGTTCCTGATCTTCGAGGTAAGTTCCTGTGGGGGAGTGATGGTACTACACCCAACCCGATTGGTTTTGTGTCTGGTACGGCCAACATCAACCTCAGCGGTACGGTAAGTAACACTGCTCTGACTGTTGCCCAAATGCCGGCGCACAATCACATTCAAGGGTATGGTCGTAACCAAACCACTAGCGTAACCAGGTATGGTTTTGTTGAGACTGGGATCAGCACGGTAGAGGATGGATTTGGATTCCAGTCTATGTCCTTGGCCCCTCTTACCTCAACCACTGGTCAAGGTGAACCGCACAACCACACGTTTACCGTGAATGCCCCCTTGGCGAATATGCCCCCGTTCTACACTGTGGCATATCTGATTAAGAACTAA

Genome Context

Tertiary structure

XKC23868.1
ESMFold structure
Source ESMFold
pLDDT 70.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Discovery and characterization of a novel Pseudomonas phage of a new genus Nicholls,P., Clark,J.R. and Maresso,A. 2026 41737826 GenBank