Protein

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Genbank accession
XKC23868.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,75
TF
Evidence Phold
Probability 1,00
Protein sequence
MGLETATYINGLVITNPDGNDGKSQGDDHLRLVKKVLKNTFPNITGAVTATQDDLNKTAIVGNFCFPGMIVAWSGAIGSIPAGWKICNGIGTISTGAPVPDLRGKFLWGSDGTTPNPIGFVSGTANINLSGTVSNTALTVAQMPAHNHIQGYGRNQTTSVTRYGFVETGISTVEDGFGFQSMSLAPLTSTTGQGEPHNHTFTVNAPLANMPPFYTVAYLIKN
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23289,96750 Da
isoelectric point:6,49149
aromaticity:0,08108
hydropathy:-0,06892

Domains

Domains [InterPro]
SSF88874
63–221
SSF88874
XKC23868.1
1 222
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JB8
[NCBI] 		3374763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC23868.1 [NCBI]
Genbank nucleotide accession
PQ473534.1 [NCBI]
CDS location
range 11315 -> 11983
strand +
CDS
ATGGGTCTTGAGACAGCAACCTATATTAATGGGTTGGTGATTACGAACCCGGATGGTAATGATGGGAAGAGCCAAGGGGATGACCACCTGAGGCTCGTTAAGAAGGTTCTCAAGAATACCTTCCCGAATATCACCGGAGCTGTTACCGCCACCCAAGACGACCTCAACAAGACCGCCATTGTAGGTAACTTCTGTTTCCCCGGAATGATCGTAGCTTGGTCTGGAGCCATTGGCTCTATCCCAGCGGGGTGGAAGATTTGCAATGGCATTGGGACTATCTCCACAGGGGCGCCCGTTCCTGATCTTCGAGGTAAGTTCCTGTGGGGGAGTGATGGTACTACACCCAACCCGATTGGTTTTGTGTCTGGTACGGCCAACATCAACCTCAGCGGTACGGTAAGTAACACTGCTCTGACTGTTGCCCAAATGCCGGCGCACAATCACATTCAAGGGTATGGTCGTAACCAAACCACTAGCGTAACCAGGTATGGTTTTGTTGAGACTGGGATCAGCACGGTAGAGGATGGATTTGGATTCCAGTCTATGTCCTTGGCCCCTCTTACCTCAACCACTGGTCAAGGTGAACCGCACAACCACACGTTTACCGTGAATGCCCCCTTGGCGAATATGCCCCCGTTCTACACTGTGGCATATCTGATTAAGAACTAA

Tertiary structure

PDB ID
992373efa41b70688648fb8163dae34ab48bd47a21fd1b3e7a4ba7243e380459
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7046
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Discovery and characterization of a novel Pseudomonas phage of a new genus Nicholls,P., Clark,J.R. and Maresso,A. 2023-08-16 — GenBank