Protein

View in Explore
Genbank accession
XEO41410.1 [GenBank]
Protein name
long tail fiber proximal subunit protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPSRAYEKGFIVEFNGRLWMAEQNIAKPAGTFFEGYWKPLRTDPKWYPFDSGKYQLKVGDYISVDTRAGLDVELTLPTSPAPQEGDTISIKDIGGLTGYTSVIVIAPVESIIDKGASIPQKRMTIPFSEWTFVYTKKQWSLFDGDEAPVARTVVPGGPIRVQSGETIIRNYDRFAPIVLTFPKFANNGDIIHFVGMNQNSVPYYHLELNTFDSNTSIMSPGIHKEIFYRSLSGYFIYNSSSSTWVLFDTDTVDRLRTVSTDTDLFPNETVTVVGKDNVTAQTIKLTLPDNVQPGDQITIALNYMRKAQTINIVPKGSDMILTNKNLTQFPKRSSYPPDGNWVNTNILSYNGNSDYPPVIKFAYIDMGPIKQWLMVDCIPALERVDPSSDATRGRLGVIALATQAQANLDKSAITAEAKEVAITPETLSNRTATEARQGIAKISTRAQNQLNTDDANYNDFDIVTPLKLNQKQATETMRGLAEIATQAETNSNTDDTRIITSKKLDGRRARTDLAGVAKLVAAGGVAPVKNGTNTRDTAGTGIYDHSDYVNIVTPKTLREFYSTEMALGTVYLANSAEVISGAASVAKYPLAVTPETLHTKTATDGRIGFTQVANQTEVNAGTDYFKYVTPKTLNDRKATEALTGIAKLATQAEFNAGTAGLISGPDKIKAYLSTPSRTAVVAASGLTQAGNLWTTTTFDIVAPTETQRGTTRLATQTEVNAGTDDITVVTPKKLHAKKATTAAEGIIRIANTAETIAGTSGTTAVCPVNLKQVIQVETSWEASASLRGPVKISSGSITFVGNDTVGSTADIETYAKSGYAISPYELNKTLVNYMPLKAKAIDSDKLDGIDSTQFIRRDINQTVEGSLTFTSPTLFNDRVDVREMLEVGKTSGESLNTDNGKLRMVSGAVAPRAWAFAIHDGNVNGVGSSTLKFGYKYLSAQPGPIDIVAYEIHHSGAIKFNNTLNVVGATTINNTLNVSGIVSTDSVGFRIAGFDALTAVSGQTKVGTTTRGLDLIATDAAFIRALDSGTVYTVMTTKNRAAILDPLYVKKSGDTMTGRLNVSQPITATIPQSLATPNAVPNSNNFGTWTIDITDPAIYNTMRPYLVGVYAKNEETGATLPWYDKYDEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWSRQWNPATNRWDGWGRMFTNNHPPLPQDIGAMSNNGSVFDSMRIRDWIQIGNLRIYANPETKTVRFDWIE
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 140274,97650 Da
isoelectric point:5,96493
aromaticity:0,08359
hydropathy:-0,28406

Domains

Domains [InterPro]
IPR036240
83–204
IPR036240 IPR048391
XEO41410.1
1 1292
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_DLP3
[NCBI] 		3243735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEO41410.1 [NCBI]
Genbank nucleotide accession
PQ034586 [NCBI]
CDS location
range 149465 -> 153343
strand +
CDS
ATGTCTGAAGTAAAAACAAGTTTCCGTGCGTCATACGGGTTGGACGCAGCCGGTGAAAAAGTAATCAATGTAGCAAAAGCTGACAAAACTGTCATGACTGATGGTGTAAACGTTGAATACCTCATCCAAGAAAACACAACCCAACAATATGATCCTTCTCGTGCATATGAGAAAGGATTTATTGTAGAATTTAATGGCCGACTTTGGATGGCCGAACAGAATATTGCTAAACCTGCAGGAACATTCTTTGAAGGTTACTGGAAGCCATTGCGTACCGACCCTAAATGGTACCCATTTGATTCTGGCAAGTATCAATTAAAAGTTGGTGATTATATTTCTGTTGATACACGTGCAGGTTTAGACGTAGAATTAACTTTACCAACATCCCCAGCACCACAAGAAGGCGACACTATTTCCATTAAAGATATTGGCGGCTTGACTGGGTATACTTCTGTTATTGTTATTGCCCCTGTTGAATCTATTATTGATAAAGGCGCAAGCATCCCACAAAAACGTATGACTATTCCATTTTCTGAGTGGACATTTGTTTATACGAAGAAGCAATGGTCATTATTCGACGGTGACGAGGCACCTGTGGCTCGCACAGTTGTACCAGGGGGACCAATTCGTGTTCAATCAGGTGAAACAATTATTCGTAATTATGATCGCTTTGCGCCTATTGTGTTGACATTCCCAAAATTCGCTAATAATGGCGATATTATCCACTTTGTAGGCATGAATCAAAATTCGGTACCATATTACCACCTAGAATTGAACACATTTGATTCTAATACAAGTATAATGTCTCCTGGCATACACAAAGAGATATTCTATCGTTCACTAAGTGGCTATTTTATTTACAATAGCTCATCGTCTACTTGGGTACTTTTTGACACAGATACAGTAGATCGACTACGAACTGTTAGTACTGATACTGATTTGTTCCCTAATGAAACTGTCACAGTAGTCGGCAAAGATAACGTAACCGCGCAAACAATTAAATTGACTCTGCCTGATAATGTGCAACCTGGTGACCAAATCACTATTGCATTGAATTATATGCGAAAGGCTCAAACAATTAATATCGTCCCTAAAGGGTCTGATATGATTTTGACTAATAAAAATCTTACACAGTTCCCTAAGCGTTCGAGTTATCCACCTGATGGCAATTGGGTCAATACCAACATTTTGTCATATAATGGAAACAGCGATTATCCGCCTGTGATTAAGTTTGCATACATTGATATGGGGCCTATTAAACAGTGGTTAATGGTCGACTGTATTCCTGCATTAGAACGCGTAGACCCTTCATCAGATGCAACACGTGGAAGATTAGGTGTTATTGCATTAGCTACCCAAGCTCAAGCGAATTTAGATAAATCTGCCATAACCGCCGAAGCGAAAGAAGTAGCGATTACACCTGAAACTTTATCAAATAGAACCGCTACCGAGGCTCGCCAAGGTATAGCTAAAATTTCAACTAGGGCACAGAACCAACTTAATACTGATGACGCTAATTATAACGATTTTGACATAGTTACTCCTCTCAAGTTGAATCAAAAACAAGCCACTGAAACTATGCGTGGTCTTGCTGAAATTGCCACTCAAGCTGAAACGAATAGCAACACCGACGACACACGAATTATTACATCTAAGAAATTGGATGGACGTAGAGCAAGAACAGATCTTGCAGGCGTAGCAAAACTCGTTGCTGCTGGCGGTGTAGCACCAGTTAAAAATGGCACAAATACACGAGATACTGCTGGTACTGGCATCTATGACCATTCAGATTATGTGAACATTGTAACTCCAAAAACATTAAGAGAATTTTATTCTACAGAAATGGCTTTAGGTACAGTGTACTTAGCAAATTCTGCTGAAGTTATTTCTGGTGCTGCATCAGTAGCGAAGTACCCATTAGCTGTTACTCCAGAAACATTGCACACAAAAACTGCTACAGATGGTAGAATCGGTTTTACCCAGGTTGCGAATCAAACCGAAGTTAATGCCGGCACCGATTATTTTAAATATGTTACGCCAAAAACATTAAATGATCGTAAAGCTACAGAAGCTTTGACTGGTATTGCTAAACTCGCAACTCAAGCTGAGTTTAATGCTGGTACTGCAGGGCTAATCTCTGGTCCAGATAAAATTAAAGCATATTTGTCTACACCTTCACGCACTGCAGTAGTTGCAGCATCCGGTTTGACTCAAGCTGGCAACCTTTGGACTACAACAACATTTGACATTGTTGCACCTACTGAAACACAACGTGGTACAACACGATTAGCTACTCAAACTGAAGTTAATGCCGGCACCGATGACATCACTGTTGTTACTCCTAAAAAGTTACATGCTAAAAAGGCTACAACTGCTGCAGAAGGTATTATTAGAATTGCTAATACTGCAGAGACTATAGCTGGAACTTCTGGCACTACCGCTGTATGTCCAGTAAACTTAAAGCAAGTAATACAAGTCGAGACGTCTTGGGAGGCTTCAGCTTCTTTGCGTGGTCCGGTAAAAATCTCTAGCGGTTCGATTACATTTGTAGGAAATGATACTGTTGGATCAACAGCAGATATTGAAACTTATGCTAAGTCCGGATATGCGATTTCACCATATGAGTTGAATAAAACTCTTGTGAATTACATGCCATTGAAAGCTAAGGCTATAGATTCCGATAAATTAGATGGAATTGACTCTACTCAGTTCATCCGTAGAGATATTAATCAGACTGTTGAAGGAAGTTTAACATTCACTAGTCCTACATTGTTTAATGATCGTGTTGACGTACGTGAAATGTTAGAAGTGGGCAAAACTTCAGGTGAATCACTTAACACAGACAATGGCAAGCTACGTATGGTTTCTGGTGCTGTAGCTCCTCGAGCTTGGGCATTTGCGATACATGACGGTAATGTTAATGGTGTTGGCTCATCTACACTTAAATTTGGCTATAAGTATCTTAGCGCTCAACCAGGTCCTATTGACATTGTTGCATATGAAATTCATCATTCCGGTGCAATTAAATTCAACAATACTTTAAATGTAGTTGGTGCGACGACAATAAACAACACACTAAATGTTTCAGGTATCGTAAGTACAGACTCTGTCGGATTCCGAATTGCTGGATTTGATGCGTTGACGGCAGTCTCAGGACAAACTAAAGTAGGTACTACTACACGTGGTTTAGACTTGATTGCAACTGATGCTGCATTTATTCGAGCTTTGGATTCAGGCACAGTATATACTGTAATGACAACAAAAAATCGTGCAGCGATTTTAGATCCATTGTATGTCAAAAAGTCTGGTGACACTATGACTGGTAGATTAAACGTCAGCCAGCCTATTACTGCTACAATTCCTCAGTCTTTAGCTACGCCTAATGCTGTACCTAATTCTAACAACTTTGGTACATGGACAATTGATATTACTGATCCTGCAATTTATAATACTATGCGTCCGTATCTTGTAGGTGTCTATGCCAAAAATGAAGAAACTGGTGCTACACTACCATGGTATGATAAGTATGATGAATTCAACGGACCTGGTACGTTGTCTCAATTTGGATCATCTGCGTCTAATGGCTCAGGTACATATCAAATTTGGGCCCCACGTCCGCCAGCAGATAAAGCAAATCTTCCTGGACATATTGCAGGAACTATGTGGTCCCGTCAATGGAATCCTGCAACAAATCGCTGGGATGGCTGGGGTAGAATGTTTACAAACAATCATCCGCCGTTACCACAAGATATTGGTGCTATGAGTAACAATGGTTCAGTCTTTGATTCTATGCGCATCAGAGATTGGATACAAATCGGCAATTTAAGAATCTATGCGAATCCAGAAACAAAAACTGTTCGCTTTGATTGGATAGAATAA

Tertiary structure

PDB ID
255a6830dd8c3b3afa64486e4f25123cc9b384fb260d29c15a861ae85d8d650b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Acinetobacter phages for therapeutic use Peters,D.L. 2022-09-29 — GenBank