Phage RBP Database

Genbank accession

CAO2433058.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,86

TF

Evidence RBPdetect2

Probability 0,55

Protein sequence

MADIKVVRIESLPATTAVTEDDYLVVQQPDLTRRVKIGDVVHVDGTVSHVISFKEGGKLNGPMDFAYFEEEDLYLRWKGEFPHTVPALSSPYSDGGITDAAWMVYTDPSLREELESTIGASMIMTAEGQSVQDVMDVTVQTANDAKALAQRVDFGTVHTVGDVIHLDNFVGPAVIEEGRTTNYPSVAAGEKFLNGVVSRRDTTTVDGIFRGATSGAMYTIAVTNGVATTKRIALRDEFKRLEANNPTRTVIRAGDDLNTAGYLQLDATGRWGMWNQQTASWQPLAIEQGGTGARDAAGVRINIGAFYKQRAALEPNFNINNLTGNQDGVYYQPRTAYATEANGYPAGSGAGHLIVWQNNANGGTGCRQEYYPFSNVDVWYLRTYQANTNQWTAWQPMVRPRNDDTFRSHIGLGPRNTPTFGHIYLSQSSADVKSASGIVNGDKYSADGVLEHGYRIYSEVRNDNKAWLTIHLHKGAKGSETHKYLGFREDGVLDCPKYMQVGDLTGQLTNWGLGEWIRSSGAERGFWGSKKAAKMVIWDGGMDESGNGTLEWGVYNNRKAKWEPLPQAAGGTGATTLADAQNLFKVPVAAGVKDFLTLPRTAGMEDGKYYPIIVRTDPYYALSTGTDITIVTRSSSGNDPMNCATLQCHYRTGGWTDRGDSFQGVINFYQNERAILGCVAPTRGKQAYVAFYVEARAFPVSVYASRNVLEVFTRENDWQVGDVTNNQNGVKFCAPLASDNLSLAIKGDDVTNTRPLAEFKGTSGFYTGGATGWHYVGTPDRMVLMSKTEMPPVEMWYNGLNYICPGSQTTRKALFSNAGFQAASEGTEDLINNTFTSKCGNGARLQGQAEFRSTPEAGQVIVRDIVGTAHRFYNFNKDGTFSAPGGFVCHTGADWNNQFGPNNPSKIIAGNVNGPQDTMVVGGLSVGFSGNYAFQIAGRQSNLYTRSIEGGNHHPWNKAMQHRGQGLGSSDLNTYHGLWEGIYHQPANNDATYDRHYPVNEAGTLIVLQNNANNGNGCVQEYITYHGDRFTRYGNMVKQVFTWGPWTQTGGNGVSFRYGGTTPEGEIPTPELKVYISGSHVTNNGGNMPANAAHMYYWGNGSTGDRPNVLEFKVLDESQSNWVWHCGTLPDKSRYLSVNGAVNCTSVNQSSDRDLKDNIAVIPDALEAIRKMKGYTYTLKENGMPYAGVIAQEVLEALPEAVSSFVQRKEIPNPDQDGTPLITEERFYSVDYAAVTGLLVQVCREQDDKITALEEQVKKLTEVVTGLQEKLK

Physico‐chemical properties

protein length:	1272 AA
molecular weight:	139384,42630 Da
isoelectric point:	5,65687
aromaticity:	0,10063
hydropathy:	-0,45181

Domain architecture

CAO2433058.1

1 1272 aa

ATT 46–117 · STR 310–395 · STR 963–1048 · CHP 1151–1257 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR040775
RBD

IPR040775 cd19958 cd19958 IPR030392

G3DSA:2.10.10.80
ATT

G3DSA:2.10.10.80 IPR030392 Coil

CAO2433058.1

11272 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1918
ATT

DC_1918 DC_1330

CAO2433058.1

11272 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR040775	RBD	DC_0821	46	103	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	47	117	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
cd19958	STR	DC_0464	310	395	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
cd19958	STR	DC_0464	963	1048	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR030392	CHP	DC_0088	1151	1257	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	1151	1202	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	1243	1270	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAO2433058.1

1 1272 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	235	235	0,9849
Central domain	236	434	200	0,1953
C-terminal	435	1272	837	0,8323

Note: Constraints were applied during segmentation.
Fixed 9 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage KCP_058 [NCBI] · taxon 3465682

Viruses

Host No host information

Genbank protein accession

CAO2433058.1 [NCBI]

Genbank nucleotide accession

OZ346216.1 [NCBI]

CDS location

range 21113 -> 24931
strand +

CDS

ATGGCTGATATTAAAGTTGTCAGAATTGAATCTCTTCCTGCCACTACCGCAGTGACAGAGGATGATTACCTGGTTGTTCAACAACCAGACCTGACCCGTCGTGTAAAAATTGGCGATGTTGTCCATGTGGATGGGACTGTTTCTCATGTAATCTCCTTTAAGGAAGGTGGTAAGTTAAACGGCCCAATGGATTTTGCCTATTTCGAAGAGGAAGATCTCTACCTGCGTTGGAAAGGCGAATTTCCACACACTGTTCCTGCACTATCTTCACCGTACTCAGATGGTGGGATTACTGACGCTGCATGGATGGTATATACTGACCCGTCCCTAAGGGAGGAGCTGGAATCTACCATTGGCGCATCTATGATCATGACAGCCGAAGGGCAGTCTGTCCAGGATGTAATGGATGTTACTGTTCAGACAGCTAACGATGCTAAAGCACTTGCACAGCGTGTAGATTTTGGTACGGTGCACACTGTAGGTGATGTTATTCACCTTGATAACTTTGTGGGTCCTGCAGTTATTGAAGAGGGAAGAACCACCAACTACCCTTCTGTAGCAGCTGGTGAAAAATTTCTGAACGGTGTGGTATCTCGTCGTGATACTACAACTGTTGATGGTATTTTCCGTGGCGCTACCTCCGGAGCCATGTATACCATTGCAGTAACCAACGGTGTAGCAACAACAAAAAGAATAGCACTTCGTGATGAATTTAAACGCCTAGAGGCAAACAACCCAACAAGAACAGTTATCCGTGCTGGAGATGATTTAAACACGGCAGGGTACTTGCAGCTTGATGCAACAGGCCGTTGGGGTATGTGGAACCAACAAACAGCCTCGTGGCAACCTCTTGCTATAGAGCAAGGCGGTACAGGGGCCAGAGATGCCGCTGGAGTGCGTATCAATATTGGGGCTTTCTATAAGCAACGTGCAGCCCTTGAGCCCAATTTCAATATCAATAACTTGACTGGTAATCAGGATGGTGTATACTACCAGCCGAGGACTGCTTATGCAACTGAGGCAAATGGTTACCCTGCAGGTTCTGGTGCTGGTCACTTGATTGTCTGGCAGAACAATGCTAACGGAGGTACAGGTTGTCGTCAGGAATACTATCCATTCTCTAACGTAGATGTTTGGTATTTGAGAACCTATCAGGCCAACACAAACCAGTGGACTGCATGGCAGCCGATGGTCAGACCTCGTAACGATGATACCTTCAGATCTCATATTGGTCTCGGGCCTAGAAATACCCCTACCTTCGGGCACATTTACCTGTCTCAAAGTTCTGCTGATGTTAAGTCAGCCTCGGGTATTGTTAACGGGGACAAATACAGCGCTGACGGTGTCCTTGAGCATGGATATAGGATCTATTCTGAGGTAAGAAACGACAATAAGGCTTGGCTGACAATCCACCTGCACAAAGGTGCAAAAGGATCTGAAACTCATAAATATTTAGGTTTCCGCGAAGACGGCGTATTAGACTGCCCTAAATATATGCAGGTTGGGGATCTTACTGGTCAGCTGACAAACTGGGGACTTGGAGAATGGATTCGTAGTTCAGGAGCAGAAAGAGGCTTCTGGGGGTCCAAGAAAGCCGCCAAGATGGTTATCTGGGATGGTGGGATGGACGAATCCGGTAACGGCACTCTGGAATGGGGTGTTTATAACAACCGGAAGGCCAAGTGGGAACCTCTACCTCAAGCCGCAGGTGGCACTGGGGCTACAACTTTAGCAGATGCTCAGAATCTGTTCAAAGTTCCTGTAGCGGCAGGCGTAAAAGACTTCTTAACACTGCCAAGAACTGCAGGAATGGAAGATGGGAAATACTACCCAATCATCGTTAGAACAGATCCGTATTACGCCCTTTCGACAGGTACAGATATTACTATAGTCACCAGGTCTTCATCTGGAAATGACCCTATGAACTGTGCCACCCTGCAGTGTCATTATAGAACTGGTGGCTGGACGGACAGGGGAGATTCTTTCCAAGGGGTTATTAATTTCTACCAAAACGAGAGAGCAATTCTTGGGTGTGTGGCTCCAACCAGAGGGAAGCAGGCGTATGTTGCATTCTATGTTGAGGCGCGTGCTTTCCCTGTCAGTGTCTACGCAAGCAGAAACGTTCTTGAGGTATTTACCAGAGAAAATGACTGGCAGGTAGGGGATGTGACTAACAACCAAAATGGTGTCAAGTTTTGCGCCCCTCTTGCGTCAGATAATTTAAGTCTTGCAATTAAAGGTGATGATGTAACAAACACCAGACCTCTTGCTGAGTTCAAGGGAACATCAGGGTTCTATACGGGTGGTGCTACAGGCTGGCACTATGTAGGCACACCTGACAGAATGGTTCTGATGAGTAAGACAGAGATGCCTCCTGTAGAGATGTGGTACAATGGTCTTAACTACATTTGCCCAGGTAGCCAAACCACTAGAAAAGCACTGTTCTCTAACGCAGGGTTCCAAGCTGCATCGGAAGGAACAGAGGATCTGATCAATAATACCTTTACCTCTAAATGCGGTAATGGTGCAAGACTGCAGGGACAGGCAGAGTTCAGATCCACCCCAGAGGCTGGTCAAGTTATTGTTCGTGATATTGTAGGCACAGCCCATAGATTCTACAACTTCAACAAAGATGGCACTTTCTCAGCTCCGGGCGGTTTTGTATGCCACACGGGTGCAGACTGGAACAACCAGTTTGGGCCTAACAACCCGTCAAAAATAATAGCTGGTAATGTTAACGGCCCACAAGATACCATGGTTGTAGGCGGGTTATCTGTAGGATTCTCGGGAAACTACGCTTTCCAGATTGCTGGCAGACAAAGTAACTTATACACCAGGTCTATAGAAGGTGGTAATCACCATCCCTGGAATAAGGCCATGCAACACAGGGGTCAAGGTCTTGGTTCTTCAGACCTTAACACCTATCACGGATTGTGGGAAGGTATTTACCATCAGCCTGCAAATAATGATGCAACATATGATCGTCATTATCCCGTAAATGAGGCCGGAACACTTATTGTGTTGCAAAATAACGCCAATAACGGTAATGGGTGTGTTCAAGAGTATATTACCTACCATGGCGATAGATTCACACGTTATGGGAATATGGTGAAACAGGTCTTCACTTGGGGCCCGTGGACTCAAACAGGTGGTAATGGTGTTAGCTTCAGGTATGGAGGAACAACCCCAGAAGGGGAAATACCAACCCCAGAGTTAAAGGTGTATATTTCTGGAAGCCATGTTACTAATAACGGTGGCAACATGCCTGCTAATGCCGCCCATATGTATTATTGGGGTAACGGCAGCACAGGAGATCGTCCAAACGTGTTAGAGTTTAAGGTTCTTGACGAGTCTCAATCAAATTGGGTATGGCATTGCGGTACCTTGCCGGATAAATCAAGATATCTTTCTGTAAACGGCGCTGTGAATTGCACATCTGTCAATCAGAGTTCTGACAGAGACCTGAAAGATAACATAGCTGTTATTCCTGATGCGTTAGAAGCTATCCGGAAGATGAAGGGTTATACTTACACTCTTAAAGAGAACGGTATGCCTTATGCAGGTGTTATAGCACAAGAAGTGCTTGAAGCTCTGCCGGAAGCGGTTAGCTCTTTCGTGCAAAGAAAGGAAATCCCAAACCCTGATCAAGATGGAACTCCTTTGATAACAGAGGAAAGATTCTACAGCGTGGATTACGCAGCTGTAACAGGCTTGCTTGTCCAGGTTTGCAGGGAACAGGATGATAAAATAACCGCCCTTGAGGAGCAGGTTAAAAAATTGACAGAGGTTGTTACTGGGTTGCAAGAGAAATTGAAGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)