Protein

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Genbank accession
QVJ12979.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSLYKLFKTNENLETDGIWLEYGQTADGKPIRIKIARAGGHNVAFSKALEKATRPYKKAIQTGMLDNKTADRLYKEVFAETVVLDWINVEGPDGQPMDFNKENVLKLFEDLPDLFVDLREQSANVALFRDEVRETDLGNSGKSSATASSKAQ
Physico‐chemical
properties
protein length:152 AA
molecular weight: 17015,99180 Da
isoelectric point:5,28946
aromaticity:0,08553
hydropathy:-0,53750

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA20
[NCBI] 		2833438 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12979.1 [NCBI]
Genbank nucleotide accession
MZ089734.1 [NCBI]
CDS location
range 60867 -> 61325
strand +
CDS
ATGAGCCTGTACAAACTGTTCAAGACCAACGAGAACCTGGAAACGGACGGCATCTGGCTGGAGTACGGCCAAACGGCGGACGGCAAGCCGATTCGCATCAAGATCGCGCGTGCCGGGGGCCACAACGTCGCCTTCTCGAAGGCGCTGGAGAAGGCCACCCGCCCGTACAAGAAGGCCATCCAGACCGGGATGCTGGACAACAAGACCGCGGACCGCCTGTACAAGGAAGTGTTCGCGGAGACGGTGGTGCTGGATTGGATCAACGTGGAAGGCCCGGACGGCCAGCCGATGGACTTCAACAAGGAGAACGTCCTGAAGCTGTTCGAGGACCTGCCGGACCTGTTCGTGGACCTCCGCGAGCAGTCCGCCAACGTGGCGCTGTTCCGCGATGAGGTACGGGAGACGGACCTGGGAAACTCTGGGAAGTCCTCTGCTACGGCTTCGAGCAAGGCCCAGTAG

Tertiary structure

PDB ID
f2bee452c0dcb2be48ec630af5e2a5b09bbac19ff99f53af699f5f30afc37360
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank