Protein

View in Explore
Genbank accession
QDH45594.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,99
Protein sequence
MSLSKYELLVGSSASDLQAKVRTRQATGSVVVYGMFYRGTSYCQAVGTGTLDIGTVTDYRIVSSPNIETFSSLVSGMLAEAQPVGTPVVYNSSLFQVMGKIQPFNMSGQNGANGKTPEIQVANGNIQWKYTTDMSWQNLISLSNLQGASADMRVSNSAIQWKRSSDTEWTTLIGLADLAGPAGATGPQGVTGNTGPAGPQGPKGETGPVGDTGPAGAQGLPGPTGPQGNPGNTGPSGPVGTTGAIGPAGPQGPQGNMGAQGGIGPQGPKGETGPAGPKGNTGDTGPTGSTGPKGDTGVAGPTGAKGDTGVAGPTGAKGDTGPTGPTGSTGPQGVKGDTGPAGPANTLSIGNVSTGTTAAATVSGTSPAQLLNLTLPRGDTGATGPKGDTGAQGPAGTNSVVESLSGTVVTAGAPVALTFTKTYSAPPVVIPIPQWNGTQMITGGAGNITRTGCSFTAMQSRGTLLLASGPFENAAAGVTFRVLVIGN
Physico‐chemical
properties
protein length:487 AA
molecular weight: 47582,22710 Da
isoelectric point:7,65533
aromaticity:0,04312
hydropathy:-0,23101

Domains

View on InterPro
Domain architecture
QDH45594.1
1 487 aa
STR 180–235 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pantoea phage vB_PagM_AAM22 [NCBI] · taxon 2588092
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pantoea agglomerans [NCBI] · taxon 549
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
QDH45594.1 [NCBI]
Genbank nucleotide accession
MK798142 [NCBI]
CDS location
range 10219 -> 11682
strand +
CDS
ATGTCCCTGTCTAAATATGAATTACTTGTTGGCTCCAGCGCATCTGATTTACAGGCTAAAGTCCGTACCAGACAGGCAACCGGCAGCGTGGTTGTCTATGGTATGTTTTATCGCGGAACCTCGTACTGTCAGGCTGTAGGCACCGGCACGCTTGACATCGGTACTGTCACAGATTACCGCATTGTCTCCTCTCCCAATATTGAAACATTCTCCTCACTTGTCAGTGGTATGCTGGCTGAAGCACAGCCTGTCGGAACACCTGTTGTGTACAACTCATCACTCTTTCAGGTGATGGGAAAGATTCAGCCTTTTAATATGAGCGGTCAGAATGGTGCTAACGGAAAGACACCAGAGATTCAGGTTGCTAATGGAAATATCCAGTGGAAGTACACAACAGATATGTCGTGGCAGAATCTCATCTCCCTCAGCAATCTGCAGGGTGCATCTGCCGACATGCGTGTAAGTAACAGTGCCATCCAGTGGAAACGCTCCAGCGACACAGAGTGGACCACGCTGATTGGACTGGCTGACCTTGCCGGACCTGCAGGAGCCACTGGACCACAGGGTGTTACAGGGAATACCGGACCAGCAGGTCCGCAGGGACCAAAAGGTGAAACAGGACCTGTCGGTGACACTGGTCCTGCGGGTGCACAAGGATTACCCGGACCAACAGGCCCACAGGGTAACCCCGGCAATACAGGACCATCTGGTCCGGTCGGTACTACAGGTGCAATTGGTCCGGCTGGTCCTCAGGGACCGCAAGGTAATATGGGTGCTCAGGGTGGGATTGGACCACAGGGACCTAAAGGAGAAACTGGCCCCGCAGGACCAAAAGGTAACACAGGTGATACAGGCCCTACTGGGTCAACCGGTCCGAAAGGCGATACAGGCGTAGCCGGACCCACAGGTGCAAAAGGCGATACAGGCGTAGCCGGACCCACAGGTGCAAAAGGCGATACAGGACCAACTGGTCCCACTGGTAGCACAGGTCCGCAGGGAGTGAAAGGCGATACTGGTCCGGCAGGTCCCGCTAATACATTGAGCATCGGAAATGTTTCCACGGGGACTACGGCAGCTGCGACAGTATCAGGTACCTCCCCTGCTCAGTTATTGAATCTTACGCTACCCCGTGGGGATACTGGCGCGACAGGACCAAAAGGTGATACAGGTGCACAAGGGCCTGCAGGTACAAATTCCGTTGTGGAATCACTGAGCGGAACCGTGGTTACAGCAGGTGCACCGGTGGCACTAACATTTACTAAGACCTACTCTGCACCGCCGGTTGTCATTCCAATTCCGCAATGGAATGGAACACAGATGATTACAGGTGGTGCGGGTAATATCACACGGACAGGATGTAGTTTTACAGCGATGCAGTCACGCGGTACGTTACTGCTGGCCAGTGGACCATTTGAGAACGCAGCAGCGGGAGTTACTTTCCGTGTGTTGGTTATTGGTAATTAG

Genome Context

Tertiary structure

QDH45594.1
ESMFold structure
Source ESMFold
pLDDT 64.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagM_AAM22 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank