Phage RBP Database

Genbank accession

LC727848.1_CDS_[43860..45443] [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

Protein sequence

MAVKISGVLKDGTGKPVENCTIQLKARRNSATVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASKAEASAANADTSAGEASESARQAAESAASAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLAPKDATRVQVFFSICRSGLVTGRGRMSRGWMKWAVIQAEQENDMNILKKLMQRLCGCGKHDDRENGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK

Physico‐chemical properties

protein length:	527 AA
molecular weight:	54388,36080 Da
isoelectric point:	4,95314
aromaticity:	0,03036
hydropathy:	-0,59032

Domain architecture

LC727848.1_CDS_[43860..45443]

1 527 aa

ATT 1–133 · RBD 360–408 · RBD 466–527

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR013609
ATT

IPR013609 IPR009640 IPR009640

LC727848.1_CDS_[43860..45443]

1527 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0488
STR

DC_0488 DC_0291

LC727848.1_CDS_[43860..45443]

1527 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013609	ATT	DC_0732	1	133	InterPro cluster	Lambda-like tail fibre protein, N-terminal	N-terminal	Medium	Text match	183 proteins / 183 hits
IPR009640	RBD	DC_0593	360	408	InterPro cluster	Bacteriophage 933W, L0121, tail fibre, C-terminal	C-terminal	Low	Positional only	120 proteins / 125 hits
IPR009640	RBD	DC_0593	466	527	InterPro cluster	Bacteriophage 933W, L0121, tail fibre, C-terminal	C-terminal	Low	Positional only	120 proteins / 125 hits

Proteins with similar domain architecture

Phage

Stx2a-converting phage Stx2a_JNE111036 [NCBI] · taxon 2977442

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

LC727848.1_CDS_[43860..45443] [NCBI]

Genbank nucleotide accession

LC727848.1 [NCBI]

CDS location

range 43860 -> 45443
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)