Protein

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Genbank accession
YP_004251180.1 [GenBank]
Protein name
tail appendage
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARQQANLEYNQFQSGLITEGNILNLPIDSFREGENFILSKANAWERRKGLGLEDSGTLYPSYVDFSDQTLVSSVHVWQTHYSAIPEILVVQFGDKLHFFDTSVDPLSNGKLFINNQEFLTTEGTTEDIISGASVEGIFVFATQDADPISLQIMDIQSDSITARTKIVVDRKVLFLETRDVWGRSAPSKERPKTLSSDYLYELINQGWDTKKINSTYATIGAYPSGYDIWWLYKTTAGTDANAIGKFTPSRMKDSTTTGIGQERQNTPAPRGSTVASLQVLASGKPSCIQTFAGRVFYAGFQATPRKIDDVRPDFRNHVFFSQLVKSNAEINKCYQFADPTSEVDSALVDTDGGFIKINAARKIVAMEEVSSGLFIIAENGVWLLSGTSDGLFSATGYHVDKITDYGCVSPRSVVAYGDTVFYWAEEGIIVLSPDQTTGKHSAQNLTELKIQSLYNELTTSSKVKSVGTVERTDKYVRWLVSENANPNNFDLEIIFSLRYGAFFINRFKSDITVAERVTGYVPERNVIGNKVVSDYFIVAGIDRVKVESADVTVPLGRRIGDEEFRDTKYLTIKSDDDSFGFYSFNQDNFKDFGLVDAEAYLLSAPQKLDDTQRRKQITSLATHMLRTDTWFKDVDGEVTRENESSMLLRIRWDFTDSPTGNKWTDITRHSQCYRYRRPMNLKQGINVYPYEVITARERIRGSGTAFQFEFRTEPNKDCKLLGWAVTVSGGTKV
Physico‐chemical
properties
protein length:734 AA
molecular weight: 82492,45010 Da
isoelectric point:5,38006
aromaticity:0,11172
hydropathy:-0,35913

Domains

View on InterPro

No domain architecture available.

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_004251180.1
1 734 aa
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,9024
Central domain 203 401 200 0,1197
C-terminal 402 734 332 0,2160
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage ICP2 [NCBI] · taxon 979533
Uroviricota Caudoviricetes Zobellviridae Icepovirus bengalense
Host
Vibrio cholerae [NCBI] · taxon 666
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YP_004251180.1 [NCBI]
Genbank nucleotide accession
NC_015158 [NCBI]
CDS location
range 8575 -> 10779
strand -
CDS
ATGGCAAGACAACAGGCTAATCTAGAATACAATCAGTTTCAGTCTGGTCTAATCACAGAAGGGAACATTCTAAATCTGCCTATTGATTCTTTCAGAGAGGGTGAGAACTTCATCCTCTCAAAAGCTAACGCTTGGGAAAGACGCAAAGGTTTGGGTTTGGAAGATTCAGGTACTTTGTATCCTTCCTACGTAGACTTCTCAGACCAAACTTTAGTATCTAGTGTTCACGTATGGCAAACTCACTATAGTGCCATTCCAGAAATTCTAGTAGTACAGTTCGGTGATAAATTACATTTCTTTGATACTTCTGTTGACCCGTTATCTAACGGGAAATTGTTTATTAACAACCAAGAATTTTTAACCACAGAAGGTACAACAGAGGATATTATTAGTGGTGCTTCGGTAGAGGGTATCTTTGTATTTGCAACTCAGGATGCAGACCCTATATCACTCCAGATTATGGATATTCAATCAGACTCAATCACTGCCCGTACTAAAATCGTAGTAGATAGAAAGGTTCTGTTCCTTGAAACTCGTGATGTGTGGGGACGTTCGGCTCCAAGTAAAGAACGGCCAAAAACCCTATCGTCAGATTATCTGTACGAGCTAATTAACCAAGGTTGGGATACTAAAAAGATTAACTCAACTTATGCCACAATCGGTGCTTATCCTAGTGGCTACGATATTTGGTGGTTATATAAAACAACTGCTGGTACAGACGCTAACGCAATCGGAAAGTTTACTCCAAGTCGGATGAAAGACAGTACAACTACCGGTATCGGTCAGGAACGTCAAAACACTCCTGCACCTCGTGGTTCTACGGTAGCGTCATTACAAGTGTTAGCTAGTGGTAAACCTTCTTGCATTCAAACATTCGCAGGTCGAGTATTCTATGCAGGATTCCAAGCAACCCCAAGAAAAATTGATGATGTACGTCCTGATTTCCGTAATCACGTATTCTTCTCACAGTTAGTTAAATCTAACGCAGAGATTAACAAGTGTTATCAGTTTGCTGACCCCACAAGTGAAGTAGACAGTGCTCTTGTTGATACAGACGGTGGTTTCATAAAAATCAACGCAGCTCGTAAGATTGTTGCAATGGAAGAAGTTTCCAGTGGTCTGTTTATCATTGCTGAAAATGGAGTGTGGTTGTTGAGTGGTACGTCAGATGGTCTGTTCTCTGCTACTGGTTATCACGTAGACAAGATTACTGACTACGGTTGTGTGTCTCCACGTTCTGTTGTGGCATATGGTGATACCGTTTTCTATTGGGCAGAGGAAGGAATCATTGTCCTATCTCCAGACCAAACAACTGGAAAACACTCTGCACAGAATCTAACAGAACTAAAGATTCAATCCTTATATAATGAGTTAACTACTTCTAGTAAGGTTAAGTCGGTAGGTACTGTAGAACGTACAGATAAATATGTCCGCTGGCTAGTTAGTGAAAATGCCAATCCAAATAACTTTGACCTAGAGATTATCTTTAGCTTACGTTATGGTGCATTCTTCATTAACCGGTTCAAGAGTGACATTACTGTAGCAGAAAGAGTTACCGGATATGTTCCAGAGCGTAACGTTATTGGTAATAAGGTAGTTAGTGATTACTTTATCGTTGCTGGTATAGATAGAGTTAAAGTAGAGTCTGCTGATGTTACAGTCCCATTGGGACGTAGAATCGGTGATGAAGAGTTCAGAGATACTAAGTATCTAACAATCAAAAGTGATGATGATTCGTTTGGATTCTATTCGTTTAACCAAGATAACTTTAAAGACTTCGGCCTAGTTGATGCAGAGGCTTACCTGTTAAGTGCTCCACAGAAATTAGACGATACTCAACGCCGTAAACAAATTACAAGCCTAGCAACTCACATGCTGAGAACTGATACTTGGTTCAAAGATGTAGATGGAGAAGTTACCAGAGAAAACGAATCTAGCATGTTGCTACGTATTCGTTGGGACTTTACCGACTCTCCTACGGGCAACAAGTGGACTGATATTACTCGTCACAGTCAGTGCTACCGTTACCGTAGACCGATGAATCTCAAACAGGGTATCAATGTGTACCCTTATGAAGTAATCACGGCCAGAGAGCGAATTAGAGGCTCAGGAACGGCATTCCAGTTTGAGTTCAGAACAGAGCCAAACAAGGATTGTAAGTTGTTAGGTTGGGCAGTAACCGTTAGTGGAGGTACTAAGGTATGA

Genome Context

Tertiary structure

YP_004251180.1
ESMFold structure
Source ESMFold
pLDDT 60.9
Oligomeric state monomer
Download structure