Phage RBP Database

Genbank accession

WJZ48860.1 [GenBank]

Protein name

central tail fiber J

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,98

Protein sequence

MSAAEWIEGAGGGGKGGGGSQRTPQEAPNTLRSTSKARIIDALGEGEIVGLANGLKSVYLDDTPLQDENGAFNFQGVTVHTRTGEPDQTHIPGFPAVETANDVSTEVTQGAPIVRTVGNLDADAVRVTVQLPALNEQNTSNGDLVGASVEVAIDVRPMGGTWAERKRDTIAGKTTSPYQRTYRIELTGSGPWDVRVRRITPDSDAATLNNATYWATYTEVIDAKLSYPDTALVALEVDAQQFGNQIPARSYDVKGLIIRVPDNYDPATRSYSGFWGGNFKLAWSDNPAWCYYDLATKTRYGAALANVDKWALYQIGQYCDELVPDGFGGEEPRFTFNTVLASQKEAITALHTLASAFRGMTYWGTNTVMPVADMPADPVKLVTPANVIDGEFVYEGTGLKARHSVAMVSYNDPNDNYRQQVEVVEDAEAIELYGWRPLEINAVACTSRGQAHRLGKWTLASERAETETVSYRASLDHADVRPGDIISVSDPTTAGARLGGRIVATGTEALTLDNVPEQASGANWFLDVMLPSGAVERRAVASFNGDEVALANPLSAPPIVGAVWILSSQAVEPRRFRVLANIEEAARVYHITALEHDPTKYGRIELGLDLPEPDYSLLPTGPVVAPYSLTAQAFTYLAGGTEHQGMTISWTPSDDPRVLRYIVEVQGPSDLRWRTVYTESGTSVDLRDVEPGQWMIRVRGVTGIGTASPWAALTTNIAGLLLPVPPDSVDIEVGTFTITLRPRGAYPGQMFEFWRSNVALALNQITSNAVRLTVSTDLTDTELSPGTTYYYYVRGANAYGVSSWYPVQATTDTTPEKLLQALSDSIRESELDQALQQRIDKIDGPETLPGSVAQRIAAEAEQRSEEVETVRGELVDGFEAEALARTQAIQQETDNRTVAITQLSEQVETEFGLLGLEINAIAAAYDATAASIYTMTQIRINEAEVVATQINQLSGRVEDNESLILDERQIRTNQYSSLATQVGILSARLDARPSLNSGFEPGADFDAWSATSGNAISAVTSGVYSGLQSALVTSTTASANPNNGGVRRIIAPETAAEFAGHEIRLAVYAKQPATGAAAEFAMAYQIAGQSVQWQRFTPTAEWAFYDVVIDVPEVTGGAQHAVAIWGSTAGGGNGVQVDRLLVTFAETDIPEVTAAIEQIQQALVDQQQAVAQELSGFETQLNSNTSAIQQEITARTTLTDSFATSIQTLQTQTQNNAAAIIAERDAWSSETDALAQQIEQLVADLGDGGAASLEEERQVRASEDEYLASLQRVLAAAEGVSSAAYQFQTTTRITAEEAEARRNEQLQAQIGDTQAAIQNEATVRANADSAQASQISALQSAASGNAASIQQEANTRASADSALSQQINTVQAAFDDELASVQQATQAQYNQTTQRLEAMWTLRIDNGGRVSGIGLGDDGEESLLGFRADRIYFAHPNSGDEVFPMVLDGGSVVMNDALINKLLFTKLRSSDDSLVFQNGKLQAEYIAVDDLVVRQGQSSNYLVGQRGWRLTTTGGEINFPIQFNNVQGAGALAGLDSVGYGDLTGAKPPTNADHTGSNTAFDTSRVAGTAASTVRDRANAGNNANNRVNNWTRPDSTLIDGNKIFTGDAYVDTLQIKGQAVTIPLSAYTGGAMVVGSEGGNNDVGGYRDYKDIQNLWVPSLPGTTEILCSFRVVFQISDGIGYPEVRLVEWNSSNMTVRYQSRIDPGLNTFAVVIPPRPNGRAFVLQLRFGSNGARNPGGLQFHASNRLIRTLTLKDNR

Physico‐chemical properties

protein length:	1759 AA
molecular weight:	189178,16190 Da
isoelectric point:	4,58022
aromaticity:	0,07334
hydropathy:	-0,26765

Domain architecture

WJZ48860.1

1 1759 aa

ATT 97–223 · ATT 342–504 · STR 628–724 · ATT 725–822 · STR 994–1143 · RBD 1382–1519 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053171
Unmapped

IPR053171 IPR015406

IPR055385
ATT

IPR055385 IPR032876 IPR003961 IPR003961 G3DSA:2.60.120.260

IPR013783
STR

IPR013783 IPR013783

IPR036116
STR

IPR036116

IPR003961
STR

IPR003961 IPR003961

IPR057587
ATT

IPR057587

WJZ48860.1

11759 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0129
STR

DC_0129 DC_2230 DC_1153

DC_0068
STR

DC_0068

WJZ48860.1

11759 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	13	1245	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	97	223	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	342	504	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	628	707	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	632	718	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036116	STR	IPR036116	645	809	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR003961	STR	DC_0003	646	715	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	722	816	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	723	815	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	723	802	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR057587	ATT	DC_0130	725	822	InterPro cluster	Tip attachment protein J, second Ig-like domain	Central	Medium	Text match	309 proteins / 309 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	994	1143	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR015406	RBD	DC_0135	1382	1519	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Proteins with similar domain architecture

Phage

Halomonas phage vB_HmeY_H4907 [NCBI] · taxon 3056163

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Halomonas meridiana [NCBI] · taxon 77097

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales

Genbank protein accession

WJZ48860.1 [NCBI]

Genbank nucleotide accession

OQ832096.1 [NCBI]

CDS location

range 3954 -> 9233
strand -

CDS

ATGAGCGCAGCTGAATGGATTGAAGGTGCGGGCGGTGGCGGCAAGGGTGGCGGCGGCAGCCAGCGCACGCCGCAGGAAGCGCCCAACACGCTGCGTTCGACCAGCAAGGCGCGCATCATCGACGCGCTGGGGGAAGGGGAGATTGTCGGCCTCGCCAATGGCTTAAAGTCGGTCTACCTAGACGATACACCGCTGCAGGACGAAAACGGCGCGTTCAACTTTCAGGGCGTGACCGTACATACCCGTACGGGCGAGCCTGACCAGACGCACATCCCCGGCTTTCCCGCCGTCGAAACCGCGAACGATGTCTCTACCGAGGTAACCCAAGGCGCGCCCATCGTGCGCACCGTGGGTAACTTGGATGCAGACGCCGTGCGCGTCACAGTGCAACTGCCTGCGCTGAACGAGCAGAACACCAGCAACGGCGATTTGGTAGGCGCATCCGTCGAAGTGGCCATCGACGTACGGCCCATGGGCGGCACATGGGCAGAGCGTAAGCGCGACACTATCGCGGGTAAAACCACCAGCCCGTACCAGCGCACCTATCGCATTGAGCTAACCGGCAGCGGCCCATGGGACGTGCGCGTTCGCCGCATTACCCCGGATAGCGACGCGGCCACGCTGAACAACGCCACCTATTGGGCCACCTACACCGAAGTCATCGACGCCAAGCTGAGCTACCCGGACACCGCCCTGGTGGCCCTGGAAGTAGACGCCCAGCAGTTCGGCAACCAGATCCCCGCCCGTAGCTACGACGTAAAAGGGTTGATCATTCGCGTGCCGGATAACTACGACCCGGCAACCCGCAGCTATAGCGGCTTTTGGGGCGGCAACTTCAAGCTGGCGTGGAGTGATAACCCGGCATGGTGCTACTACGACTTAGCCACTAAAACCCGCTACGGGGCAGCACTGGCCAACGTCGATAAGTGGGCGCTGTATCAGATCGGCCAATACTGTGATGAGTTGGTGCCGGACGGTTTCGGTGGCGAAGAACCGCGCTTTACGTTTAATACGGTGCTGGCGAGCCAAAAAGAGGCCATTACCGCGCTGCATACCCTCGCCAGCGCGTTTCGTGGCATGACCTATTGGGGTACCAACACCGTCATGCCGGTGGCCGATATGCCCGCCGACCCGGTGAAGCTGGTCACGCCTGCCAACGTGATCGACGGTGAGTTTGTTTATGAAGGCACTGGGCTGAAGGCACGCCATAGCGTCGCTATGGTGAGTTACAACGACCCCAACGATAACTACCGGCAGCAGGTGGAAGTGGTCGAAGATGCCGAGGCTATCGAGCTGTACGGCTGGCGACCGCTGGAAATTAACGCGGTGGCCTGTACCTCACGCGGGCAGGCCCACCGGCTGGGCAAATGGACGCTGGCCAGCGAGCGCGCCGAAACCGAAACCGTGAGCTACCGGGCGAGCCTGGACCATGCCGACGTTCGCCCCGGCGATATTATCAGCGTTTCCGACCCGACCACCGCCGGGGCGCGGCTGGGCGGTCGCATCGTGGCCACCGGCACTGAGGCGCTGACGCTCGATAACGTGCCGGAACAGGCCAGCGGCGCTAACTGGTTTTTAGATGTGATGCTGCCCAGCGGGGCAGTGGAACGCCGCGCCGTGGCATCGTTTAACGGCGATGAAGTGGCGTTGGCTAATCCGCTATCCGCGCCGCCCATCGTGGGCGCGGTGTGGATTCTATCGAGCCAAGCCGTGGAGCCCCGGCGCTTTCGGGTGCTAGCCAACATCGAAGAGGCGGCGCGGGTGTATCACATCACCGCGCTGGAGCACGACCCGACCAAATACGGCCGCATCGAGCTAGGGCTAGACCTGCCGGAGCCGGACTACTCGCTACTGCCCACCGGCCCGGTCGTGGCCCCGTACAGCCTCACCGCGCAGGCGTTTACCTATCTGGCGGGTGGCACTGAACACCAAGGGATGACGATTAGCTGGACGCCCAGCGACGACCCCCGCGTTTTGCGTTACATCGTGGAAGTGCAGGGGCCTAGCGACCTGCGTTGGCGCACGGTGTACACCGAAAGCGGCACCAGTGTGGACCTGCGCGACGTGGAGCCGGGCCAGTGGATGATTCGCGTGCGTGGGGTCACGGGCATCGGCACCGCCTCGCCATGGGCCGCGCTGACCACCAACATCGCGGGCCTGCTGCTGCCGGTGCCCCCGGATAGCGTCGATATTGAGGTGGGTACCTTCACGATCACGTTACGCCCACGCGGGGCGTATCCGGGGCAGATGTTCGAGTTCTGGCGGTCTAACGTTGCCTTGGCGTTGAACCAGATCACCAGTAACGCGGTGCGCCTGACCGTATCCACCGACCTCACCGACACCGAGCTAAGCCCCGGCACCACGTATTACTACTACGTGCGCGGTGCCAACGCTTATGGGGTGAGCAGCTGGTACCCGGTACAGGCCACCACCGACACCACTCCCGAAAAACTACTGCAAGCGCTAAGCGACAGCATCCGCGAAAGCGAGCTAGACCAAGCCCTCCAACAGCGTATCGACAAAATCGACGGCCCCGAAACGCTACCCGGCAGCGTTGCCCAGCGCATCGCCGCCGAAGCCGAGCAGCGTAGCGAGGAAGTCGAGACGGTGCGCGGCGAGCTGGTCGACGGCTTTGAAGCCGAAGCCCTGGCCCGTACCCAAGCCATCCAGCAGGAAACCGACAACCGCACGGTGGCCATCACTCAGCTAAGCGAGCAGGTGGAGACTGAGTTCGGACTGCTGGGGTTAGAGATCAACGCCATTGCAGCGGCGTACGATGCTACTGCCGCCTCTATCTACACGATGACGCAGATCCGCATTAACGAAGCGGAGGTGGTCGCTACTCAGATCAATCAGCTGAGCGGGCGTGTAGAGGACAACGAATCGCTGATCCTCGACGAGCGGCAGATTCGTACCAACCAATACAGCTCGCTGGCCACCCAGGTCGGCATCCTCTCAGCGCGGCTGGATGCCCGCCCATCGCTTAACTCAGGCTTTGAACCGGGTGCGGATTTTGATGCGTGGAGCGCGACCAGCGGCAACGCCATTAGCGCGGTCACCAGCGGCGTCTACAGTGGTCTGCAATCTGCGTTGGTCACGTCCACCACCGCAAGCGCGAACCCCAACAACGGGGGCGTGCGTCGCATCATCGCCCCGGAAACGGCAGCGGAGTTTGCGGGGCATGAGATCCGCTTAGCGGTGTATGCCAAACAGCCCGCCACCGGCGCGGCCGCAGAGTTCGCCATGGCGTATCAGATAGCCGGGCAGTCGGTGCAGTGGCAGCGGTTCACGCCGACGGCTGAGTGGGCGTTTTATGACGTCGTGATCGACGTACCCGAGGTCACCGGCGGCGCGCAGCACGCCGTCGCTATTTGGGGCAGCACTGCCGGGGGCGGCAACGGTGTGCAGGTCGACCGCCTGTTAGTGACGTTCGCGGAGACGGACATTCCCGAGGTCACCGCCGCTATCGAGCAGATCCAACAAGCGCTAGTCGATCAACAGCAGGCCGTGGCGCAAGAGCTGAGCGGTTTTGAAACGCAGCTCAACAGCAACACGTCTGCCATCCAGCAGGAGATCACGGCGCGCACCACGCTAACGGATTCATTCGCCACCAGCATTCAAACGCTGCAAACCCAAACCCAAAACAACGCCGCGGCGATTATTGCCGAACGTGACGCGTGGAGTAGCGAAACCGACGCCCTCGCTCAGCAGATCGAGCAGCTGGTGGCCGATTTGGGCGACGGTGGGGCAGCCTCGCTTGAAGAAGAACGGCAAGTGCGGGCGAGTGAAGACGAGTACCTAGCATCTCTTCAACGGGTGCTCGCTGCCGCTGAGGGGGTTAGTTCTGCCGCTTATCAGTTCCAGACCACTACCCGCATCACCGCCGAAGAAGCCGAAGCGCGCCGTAACGAGCAGCTGCAAGCTCAGATAGGCGACACCCAGGCCGCCATTCAGAACGAAGCCACCGTTCGCGCCAATGCCGATAGCGCGCAAGCGTCGCAGATCAGCGCCCTACAAAGCGCTGCCAGCGGCAATGCCGCCTCGATTCAACAGGAGGCCAACACGCGGGCAAGCGCTGATAGCGCACTGTCGCAGCAGATCAACACCGTTCAAGCGGCGTTTGACGACGAGCTGGCCAGCGTTCAGCAGGCTACCCAAGCGCAGTACAACCAGACCACCCAGCGTTTGGAGGCCATGTGGACGCTACGCATCGACAACGGCGGACGGGTGTCGGGGATCGGTCTTGGAGATGACGGCGAAGAAAGCCTACTGGGATTCCGCGCCGACCGTATCTACTTCGCCCACCCCAACAGTGGTGACGAAGTTTTCCCGATGGTACTGGATGGCGGCTCGGTCGTGATGAACGACGCACTGATCAACAAGCTGCTGTTCACCAAGCTGCGTAGCTCTGACGACTCTCTGGTGTTCCAAAACGGCAAGCTGCAGGCCGAGTACATCGCGGTGGATGATCTGGTCGTCAGGCAGGGGCAGTCCAGCAACTACCTGGTAGGCCAGCGCGGTTGGCGGCTGACGACCACCGGCGGGGAGATCAATTTCCCGATCCAGTTCAATAACGTACAAGGCGCGGGAGCCTTAGCAGGGTTGGACTCGGTGGGTTACGGGGATCTGACGGGAGCTAAGCCACCCACCAATGCAGACCATACGGGCAGCAATACCGCCTTTGACACAAGTCGGGTGGCGGGCACGGCGGCGTCGACTGTGCGCGACCGCGCCAATGCTGGCAATAACGCTAACAACCGAGTGAACAACTGGACGCGCCCCGATTCTACACTAATTGACGGCAACAAGATTTTCACTGGTGATGCGTATGTCGATACGTTGCAGATCAAGGGTCAAGCGGTAACTATTCCCCTATCTGCGTACACGGGGGGAGCAATGGTAGTAGGCTCCGAGGGTGGGAATAATGATGTAGGAGGCTATCGCGACTATAAAGACATTCAAAATTTGTGGGTTCCGAGCCTACCAGGTACTACGGAGATTTTATGCTCATTTAGGGTAGTGTTCCAGATTAGTGATGGAATTGGGTACCCCGAAGTTCGGCTAGTGGAATGGAACAGTAGCAATATGACAGTACGGTATCAGTCTCGGATCGATCCAGGGCTTAATACGTTCGCTGTTGTTATACCCCCCAGACCAAACGGTCGCGCCTTCGTCCTACAACTTAGATTCGGAAGCAACGGCGCGCGTAACCCTGGTGGGCTGCAATTTCATGCAAGTAACAGGCTTATTCGTACACTTACTCTAAAGGATAATCGCTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)