Phage RBP Database

Genbank accession

SBV38303.1 [GenBank]

Protein name

Phage tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,93

Protein sequence

MLTRIPVSMIKASGADGSAVVVESGKLKSSDETVTTASEITAGFYDQGSGVLTLTFSNGQDVAITGFPTFDSIPEGPQGPQGEPGLDGQDGRDGRDGEEGPEGCAGPVGPTGDKGPRGEDGRPGQVGPPGPQGVQGPMGERGPTGAQGPQGKVGITGPTGETGPTGPQGDQGPAGTINIIISETDPGASAGPGAIWVNPAIGQYDDDLDQFA

Physico‐chemical properties

protein length:	212 AA
molecular weight:	20923,43550 Da
isoelectric point:	4,05003
aromaticity:	0,03774
hydropathy:	-0,54104

Domain architecture

SBV38303.1

1 212 aa

STR 75–128 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

PTHR24637
Unmapped

PTHR24637

IPR008160
STR

IPR008160

SBV38303.1

1212 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0479
ATT

DC_0479 DC_1479

SBV38303.1

1212 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
PTHR24637	Unmapped	-	44	188	PANTHER	COLLAGEN	-	-	-	-
IPR008160	STR	DC_0536	75	128	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits

Proteins with similar domain architecture

Phage

Phage NCTB [NCBI] · taxon 1857647

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

SBV38303.1 [NCBI]

Genbank nucleotide accession

LT598654.1 [NCBI]

CDS location

range 101059 -> 101697
strand -

CDS

ATGCTTACACGAATTCCAGTGTCGATGATTAAAGCAAGCGGTGCCGACGGTAGTGCCGTTGTTGTCGAATCAGGCAAGCTTAAATCAAGTGACGAAACAGTAACAACAGCCAGTGAGATAACCGCTGGCTTTTATGATCAGGGAAGCGGAGTCCTAACACTAACATTCTCCAATGGTCAGGATGTTGCTATTACAGGATTCCCTACTTTCGATAGTATACCAGAAGGACCTCAAGGGCCTCAGGGTGAACCAGGCTTAGACGGTCAGGACGGTCGTGATGGAAGGGACGGCGAAGAAGGTCCCGAAGGTTGTGCAGGACCTGTAGGACCAACCGGAGACAAAGGACCTAGAGGTGAAGATGGAAGACCCGGACAAGTTGGTCCTCCCGGCCCTCAAGGTGTACAAGGCCCTATGGGTGAGCGCGGTCCTACTGGAGCACAAGGTCCTCAAGGTAAAGTGGGAATAACAGGTCCTACAGGAGAAACAGGTCCTACTGGTCCGCAAGGAGATCAAGGTCCTGCAGGTACTATCAACATTATTATCTCTGAAACTGATCCAGGTGCGTCAGCAGGACCTGGTGCGATATGGGTCAATCCAGCTATCGGTCAGTATGACGACGACTTAGACCAATTTGCGTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)