Protein

View in Explore
Genbank accession
YP_010093461.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,47
Protein sequence
MATIEDLANQVGELTDATTDLLTEVNGQKGRLENLADGAQDSANDAQSHANASAGSAIDSSNYANDSAGSAQQSATSAAEAKTYRDQAEEISGLDTVEEAVDLALDARHFGVLSEAEAEAIRADNEEECAASGFVHFGKAPYSTGNDRRTPINEGLSAPFVSDLTNRLLLGINENHSSAGIRGNSKTIRPFVNIAGITTELTHINNNGTSTYNGSNYIYFPPAPNGTVTYDSATGVITDFTKEVDNKYGDVAADLNEAVARAFEGDCRNGDFRNGTTDWSGSGTTISASANELTLTADSGIGSRYATSARNEFWDIGDVVKVKLDILRVGSTGTLLAYWWGQTDATQSVEATPDEWYTMEFTFTVDNVSSNSTKNLYAGTSSNIPEGGQIKIRNVSYTKVTNEVVTERVDMWGFEQWHEEVTDGEVFDCVQSRATTFGDTDVPTVLSKRPLSYFQVYDGQFEDPSAINDQYRCVDWNAITDVQKKKVAAYLKEKLFVGENGNLVNVRIRQRTIAGAGNGDWRNIDSIGSGSTSISFDGKYLAAQGVLDSKATFANGTGCYFSNGAPYEVKSLAETGVFVVNGGGGSATPNTSVAYKGECYFLVCGTVPRLNQGMYVVGLNEHGSVADVSGKKWYETSEEFNTLADCFNQEKISHD
Physico‐chemical
properties
protein length:655 AA
molecular weight: 70399,82320 Da
isoelectric point:4,48553
aromaticity:0,09008
hydropathy:-0,42534

Domains

View on InterPro

No domain architecture available.

Taxonomy

Phage
Vibrio phage 1.245.O._10N.261.54.C7 [NCBI] · taxon 1881236
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Vibrio breoganii [NCBI] · taxon 553239
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YP_010093461.1 [NCBI]
Genbank nucleotide accession
NC_055736.1 [NCBI]
CDS location
range 9203 -> 11170
strand +
CDS
ATGGCAACAATAGAAGACTTGGCAAATCAGGTAGGGGAACTTACTGATGCCACAACAGACCTATTAACGGAAGTTAATGGACAAAAAGGAAGGCTAGAGAATTTAGCAGATGGTGCACAAGATAGTGCTAATGACGCTCAATCCCACGCCAATGCCTCGGCAGGAAGTGCAATCGATTCTAGCAACTACGCTAATGATTCAGCAGGTAGCGCACAACAGTCTGCAACCAGTGCCGCAGAGGCTAAAACATATCGTGACCAAGCAGAAGAAATCTCTGGTTTAGACACCGTAGAAGAAGCCGTTGATTTAGCACTAGATGCTCGACACTTTGGTGTATTGAGTGAAGCCGAAGCTGAGGCTATCCGCGCAGATAATGAAGAAGAATGCGCTGCTAGTGGTTTTGTGCATTTCGGTAAAGCCCCCTATAGTACAGGGAACGATAGGCGCACGCCAATCAACGAAGGGCTATCAGCTCCTTTTGTTTCCGACCTCACAAACAGGCTGCTCTTAGGGATTAATGAGAATCATTCCTCAGCAGGAATCAGGGGGAATAGTAAGACCATACGCCCTTTTGTGAACATCGCTGGAATTACTACAGAGCTGACCCACATAAATAATAATGGGACCAGTACTTATAATGGGTCAAACTATATATATTTCCCCCCTGCACCCAACGGCACAGTCACTTATGACTCCGCCACAGGTGTTATCACTGACTTTACCAAGGAAGTTGACAATAAGTATGGTGATGTAGCAGCCGATTTGAATGAAGCTGTTGCAAGGGCTTTTGAGGGTGACTGTAGGAATGGTGATTTTCGCAATGGTACAACCGACTGGTCGGGTTCAGGGACTACGATCTCAGCAAGCGCCAACGAGTTAACATTAACCGCAGACTCAGGAATTGGTTCTAGGTATGCAACCTCTGCAAGAAACGAGTTCTGGGATATAGGAGATGTCGTAAAGGTTAAGCTCGATATTTTACGTGTGGGTTCGACTGGGACGTTACTTGCTTACTGGTGGGGACAAACAGACGCAACCCAATCTGTCGAAGCAACCCCCGATGAATGGTACACCATGGAGTTCACCTTCACTGTAGATAACGTTTCGTCGAATTCAACGAAAAACCTTTACGCTGGTACTAGCTCTAATATTCCTGAGGGTGGCCAGATTAAGATTAGAAACGTATCTTACACCAAAGTAACCAACGAAGTAGTAACCGAACGTGTAGACATGTGGGGCTTTGAGCAGTGGCATGAAGAAGTAACCGATGGTGAAGTATTTGACTGTGTTCAATCACGAGCTACTACCTTTGGTGATACTGATGTACCTACTGTTTTATCTAAACGCCCACTAAGTTATTTCCAAGTGTATGACGGTCAGTTTGAAGACCCTAGTGCCATCAATGACCAATACCGCTGTGTTGACTGGAATGCCATTACTGACGTACAGAAGAAGAAAGTAGCTGCTTACCTGAAAGAGAAACTGTTTGTAGGTGAGAATGGTAACTTGGTTAATGTACGTATTCGTCAGCGTACTATTGCAGGTGCAGGTAATGGGGATTGGAGGAATATTGATAGTATTGGTAGCGGCAGCACCTCAATTTCTTTTGATGGTAAATACCTAGCAGCCCAAGGCGTTTTAGATAGTAAAGCTACCTTTGCAAATGGTACGGGGTGCTACTTTAGTAATGGTGCTCCTTATGAAGTTAAATCCCTAGCAGAAACGGGGGTATTTGTGGTTAATGGGGGAGGGGGTAGTGCTACCCCTAATACAAGTGTTGCTTACAAAGGTGAATGCTACTTCCTAGTATGTGGTACTGTCCCAAGATTGAACCAAGGAATGTATGTGGTTGGTTTAAATGAACATGGTTCTGTGGCAGATGTATCTGGTAAAAAGTGGTATGAAACTTCCGAGGAGTTCAACACATTAGCCGACTGCTTTAATCAGGAGAAAATCAGCCATGATTAA

Genome Context

Tertiary structure

YP_010093461.1
ColabFold structure
Source ColabFold
pLDDT 87.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank