Protein

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Genbank accession
UGO54078.1 [GenBank]
Protein name
putative polygalacturonase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MVDQVKISELGKATVVRESDAIPLNNTTTRGLPITRQADITNIRSAILFNDAFNSIEEGLDITNNGDSFYVYNDADKLTVARYLKINDVASPVVGENGKQIIEGTGIALKTIGDLGGPFGFGVVGRVDSYDSLRNLVPTKEGQVVYLNGFHSGSHLGGGAFISSLTYSVDDGGTVASVSNGNYSWKRLLGNEINLEMFGAVGDGVNVDNDSIDNALAFCKLNGKSDNNIIVKLTRNYRVNKSFELTSFTSIIGPGEIFIDSQDLTLILFTGSDLESLLIQGLIISRAVDKPATMWSKGATAIQLTRVKDLTIRDNDISLQTDAISVSNSDRVLIENNKTHELGEEGIAIRSSRNFIVRGNHVFHHHGDGILMKTGNIECHDGQIVDNFVYDGLIDPVAAVGQRGGGITLNDENINGAGGSSTTMDGLVVSRNTCRNLSYGIAFNNLTSAVIQGNIITGVTRFGLVIDTTPFNNPALNPVLRFSVSGNILKDIGEVGIGFRSNRGITVDYVSVTGNVIENAGYKTNGDFPSLDIGTGTVTGNTVVNGRVAIMASGNALINANQFIGSPFTSPGANSVWIKLSESVTFSNNLVKDTNMGHIRMSATKNMIFTNNNIDTASTYGVLAFVTSGLPYGHSMFRDNIYITKAPSVCNFTIGADSIRSLGLSRAEFGNNDYMYDSTLSSLVNYKKGDRISLVAPEGGASTYVVIDETGKKAAVEFTPYYVKSNTFTQSVPANGTAVIVAQDSKVKGTWAVGKVWCSVNRNGVMIQCDCTKDGEVTIRFVNTTAATVTLTNAVVTLECFEMPNI
Physico‐chemical
properties
protein length:806 AA
molecular weight: 86222,95840 Da
isoelectric point:5,26678
aromaticity:0,07444
hydropathy:-0,03065

Domains

Domains [InterPro]
IPR012334
192–491
IPR012334 IPR006626 IPR006626
IPR011050
201–491
IPR011050 IPR039448
IPR039448
298–413
IPR039448 IPR006626 IPR006626 IPR006626
IPR006626
307–328
IPR006626 IPR006626 IPR006626 IPR011050
UGO54078.1
1 806
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_Haymo
[NCBI] 		2902685 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO54078.1 [NCBI]
Genbank nucleotide accession
OL539468 [NCBI]
CDS location
range 107870 -> 110290
strand +
CDS
ATGGTTGATCAGGTTAAAATATCTGAGCTAGGTAAGGCTACCGTTGTACGGGAAAGTGATGCTATCCCGCTGAATAATACAACCACGCGAGGTTTGCCGATTACCAGACAGGCTGATATTACCAATATTCGTTCTGCAATATTGTTCAATGACGCATTCAACAGTATCGAAGAAGGATTAGATATTACTAATAACGGCGACTCTTTCTACGTCTATAACGATGCAGATAAGTTAACAGTTGCTCGGTATTTGAAAATAAACGACGTCGCCAGTCCTGTTGTTGGTGAAAACGGGAAACAGATTATAGAGGGCACGGGTATCGCACTTAAGACTATAGGTGACCTAGGCGGCCCGTTTGGTTTCGGAGTTGTTGGACGAGTAGACTCCTACGATTCATTGCGTAATTTAGTACCTACTAAAGAGGGTCAGGTAGTTTACCTCAACGGATTTCATTCCGGTAGCCATTTAGGCGGGGGTGCATTTATATCCTCGCTAACCTACTCAGTCGATGACGGTGGTACGGTCGCATCTGTCAGTAATGGTAATTACTCATGGAAACGTCTGTTAGGTAATGAAATAAACTTAGAGATGTTCGGCGCAGTCGGTGATGGCGTAAATGTAGATAATGACTCGATAGACAATGCTTTGGCGTTTTGTAAGCTCAACGGAAAAAGTGATAATAACATCATTGTTAAGTTGACTAGAAACTACAGGGTAAATAAGTCTTTTGAGTTGACAAGCTTTACATCCATCATCGGTCCAGGGGAAATCTTTATTGACTCCCAAGACCTTACTCTGATATTATTCACCGGATCAGACTTAGAGTCACTTCTTATTCAAGGGTTGATTATCAGCAGGGCTGTCGATAAACCGGCTACTATGTGGAGTAAGGGCGCAACTGCTATCCAGTTGACTCGGGTAAAAGACTTGACTATTCGGGACAACGATATCTCGTTACAAACCGACGCTATCTCGGTAAGTAACTCCGACCGAGTCCTGATTGAAAACAACAAAACGCACGAATTAGGCGAAGAAGGTATTGCCATCCGTAGCAGCCGTAACTTTATTGTCAGAGGTAACCACGTCTTCCACCATCACGGAGATGGGATTTTAATGAAGACGGGTAACATCGAGTGCCACGATGGTCAGATAGTAGATAACTTCGTTTATGATGGTCTGATCGATCCAGTTGCCGCTGTCGGTCAACGCGGCGGTGGTATAACTCTTAATGACGAAAATATTAACGGTGCCGGCGGATCTAGTACCACGATGGACGGATTAGTCGTTTCTCGTAATACCTGTCGTAATTTGAGCTATGGTATAGCGTTCAATAACTTAACCAGCGCGGTTATCCAAGGTAACATCATTACTGGCGTCACGCGATTCGGTTTAGTTATTGATACCACGCCATTCAATAACCCTGCACTTAACCCAGTATTACGTTTCTCAGTAAGTGGCAACATCCTAAAGGATATTGGCGAGGTTGGTATCGGGTTCCGTTCAAACCGTGGCATTACGGTAGATTATGTTAGTGTAACAGGTAACGTAATTGAGAATGCCGGCTACAAGACTAATGGCGATTTCCCATCGTTAGACATCGGTACCGGTACTGTAACTGGGAATACAGTAGTCAATGGTAGAGTAGCTATCATGGCCTCCGGGAACGCGTTAATTAACGCTAACCAATTTATCGGATCTCCGTTTACTTCCCCAGGCGCTAACTCGGTATGGATAAAATTATCTGAATCGGTGACCTTCAGTAACAACTTAGTGAAGGATACCAATATGGGTCATATTCGGATGTCAGCAACTAAGAATATGATCTTCACTAACAACAACATCGATACAGCGAGTACGTACGGTGTTCTGGCGTTCGTCACTTCCGGGCTACCTTACGGTCATTCCATGTTCCGAGATAATATTTATATTACCAAGGCCCCTTCGGTATGTAACTTTACCATCGGTGCTGACTCTATCAGGTCCTTAGGGTTGAGTAGGGCTGAGTTTGGTAACAACGACTACATGTACGACTCGACTTTATCTTCCCTGGTTAACTACAAAAAGGGCGATCGCATTTCCTTAGTTGCCCCAGAGGGAGGAGCGAGTACTTACGTAGTTATCGATGAAACTGGTAAAAAGGCCGCTGTTGAGTTCACTCCGTATTACGTCAAGTCTAATACGTTTACTCAATCGGTACCGGCCAACGGGACTGCGGTGATCGTGGCACAAGATTCAAAAGTTAAAGGTACCTGGGCCGTCGGTAAAGTTTGGTGTTCGGTCAATCGTAATGGTGTAATGATTCAGTGCGATTGCACCAAGGATGGGGAAGTAACGATTCGATTTGTTAACACGACTGCTGCTACAGTGACGTTGACTAACGCAGTTGTTACACTAGAATGTTTTGAGATGCCTAACATTTAA

Tertiary structure

PDB ID
05118348d1ddd0e3239f7cd9b0e5d666569fc4868dd1c7e34691cf357846dd2c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50