Protein

View in Explore
Genbank accession
AFV81324.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MRTITIKYPTLEHTLPVFSAQDHGYDGSDDSLFLALVNGVPSFAVMADIESEAHDSVLNFPTRIPVGGIERRFHGYGPATLHGVEFKQLTNADIVALTDVVIPEWDAHYGDAWEHTFSGCEVSPVIVAAIHAGEGIWTEEVQTDWGELNTEYPTVDADGAEYMVLSRQEYQRYEHDQARDQLVDRIDALEDDILRSLFNRNQQSLINDFKNMAEFDPKYAKSIIVASRVFQVIELD
Physico‐chemical
properties
protein length:236 AA
molecular weight: 26605,21650 Da
isoelectric point:4,45273
aromaticity:0,10169
hydropathy:-0,26780

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_MAR10
[NCBI] 		1229755 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV81324.1 [NCBI]
Genbank nucleotide accession
JX556418 [NCBI]
CDS location
range 69179 -> 69889
strand +
CDS
ATGCGTACTATCACTATCAAATACCCAACACTTGAACACACTCTTCCAGTATTCAGCGCCCAAGACCACGGCTACGATGGCAGCGACGACAGCCTTTTCCTAGCACTGGTTAATGGCGTCCCATCGTTTGCAGTTATGGCGGACATCGAATCTGAAGCGCACGACTCAGTTCTTAACTTCCCGACTCGCATCCCGGTAGGCGGTATCGAGCGCCGTTTCCACGGCTACGGTCCAGCTACTCTTCATGGTGTCGAGTTCAAGCAACTTACTAACGCGGACATCGTTGCCCTTACTGACGTTGTGATCCCGGAGTGGGATGCGCACTACGGCGACGCGTGGGAGCATACATTCTCAGGGTGCGAAGTAAGCCCGGTTATTGTGGCGGCTATTCACGCCGGGGAAGGTATCTGGACTGAAGAGGTTCAAACCGACTGGGGCGAGCTCAACACAGAATACCCAACAGTTGACGCGGACGGCGCAGAATACATGGTCCTATCCCGTCAAGAATACCAACGCTACGAGCACGACCAAGCGCGTGACCAATTGGTAGACCGTATCGACGCGCTGGAAGATGACATTCTACGCTCGTTGTTCAACCGCAACCAACAGAGTCTTATTAACGACTTTAAAAACATGGCGGAGTTTGATCCGAAATACGCTAAAAGCATCATTGTAGCCTCTCGCGTGTTCCAAGTAATCGAACTCGACTAA

Tertiary structure

PDB ID
b48df5914ec7835d8ecdd9a74739f25b1d84031f1ab8c705c4769c38c0f84682
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50