Protein

View in Explore
Genbank accession
WVQ00233.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTIRIVRNDAGNCINFYGTSNPTYWNACLSASIDEDFPVRINVRNDIRSAEEGTDVYEFYQIPYTNFVDRDNNSFESPAECAQYITDNANVSGDVGTYIFSETDTLDVEREVTDTTVLFSNGDIYPVNALRAIADTNGTITVRTVRGDKDIYLNIRHYNLTVNSGALSFTTLSAAVDRLNEVLTGTTIGTNGGSPAANAPTASSATTFEIYGDRITETGSGSTLGYTSTADGDNFDTSNGILSVQSISEAGEFFEFSQDSGDWTNTVGLTFGLFDETTYDRSDLEVDAPSNSVKAVIRLRVKNSGLIFKDPGSTYGRLNESGLHNELDTRTTFRVGLDGERRGYVAFLLPTGLYEVVGRTETAIASGTELKFVAILPLANEMNGVRNMTVNTLIPGAPILTWYYIESPDGSFHYPLFATAAEANFVDEQYGTAGTGLGSSHQELFVDEQPSQNIWFMPDTFAFEDESSAPTSPVGVPWNEIQTGDDANYIPAAYVDNTVTVDEGATINLEIKPSGDSATYNVTGVPSGLAFDGSYLTGTAPEVADNNVNNPNDTFTITVTKANNYGSSVGTLTLVVNNLTLPATALSGFTWDNTSTTLVDEFTMGEGSVVTMDDTLQDGKRFVIDEAWVETNVLPNLLADGDEVIIGVAASGANWTSIEDADFDFYMSWRRNATNQIISNLYDGSDDELVINSLTDAYYDYGFEVNGTTVYLIACNVGDLNSEPSPALGGNFVRVKTIASYSGTIPLTLTMATISAEAGLSTSGIAEIDTPLPTGNLTDWNKAIVFSGNTERTYQFDFTETFNPIQMARTSQLVSAPSTTGNTVSTGHPWATTVVFRTDGNASDQYIWTQGEGTASTNDNIYLRLDSNGAMYFGWGRQGDLNEVVIGNGFTQSSATSQWYGVYIAHNGTRLSATDATAANLAAAFDIRIMKFFNPTGWDFVGANGSFADSVGNRSTVTNWNRGGSTVGGRMDRIYSGGFYVGGSTGANKSFHGKVASMVVTTLRQGVSMPSDAEILEMTTDPMRWLSTYKAGNNYRSAGGTSETATFTLGNTFSGWATHVWLMGDGNTDTFPDIRNQVQVNDNYTKLVMTSMVAGDIQTVNIAGLT
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 119264,27340 Da
isoelectric point:4,18820
aromaticity:0,10298
hydropathy:-0,22746

Domains

View on InterPro
Domain architecture
WVQ00233.1
1 1107 aa
STR 489–579 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WVQ00233.1
1 1107 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0420
Central domain 11 283 274 0,9132
C-terminal 284 1107 823 0,3619
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage MA01 [NCBI] · taxon 3117464
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Synechococcus sp. MW02 [NCBI] · taxon 1620844
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
WVQ00233.1 [NCBI]
Genbank nucleotide accession
PP110484 [NCBI]
CDS location
range 80536 -> 83859
strand +
CDS
ATGTCTACCATCCGCATTGTTCGCAACGACGCAGGTAACTGTATTAACTTTTACGGTACCTCCAACCCAACCTATTGGAACGCCTGTCTGTCGGCTTCGATCGACGAGGACTTTCCCGTTCGCATCAACGTTCGTAACGACATCCGTTCGGCAGAAGAGGGTACTGATGTCTATGAGTTCTACCAGATTCCTTATACCAATTTCGTTGATAGGGATAACAACTCCTTTGAATCACCAGCCGAATGTGCTCAGTACATTACTGACAATGCAAACGTAAGTGGTGACGTTGGTACTTATATCTTCAGTGAAACTGACACTCTAGATGTCGAACGCGAGGTGACGGATACGACTGTACTATTTTCTAATGGTGATATCTACCCCGTAAACGCTCTGCGTGCTATTGCTGATACCAACGGTACGATTACTGTTCGTACTGTTAGGGGAGACAAGGACATCTATCTGAATATCCGTCATTACAACTTAACCGTAAATAGTGGCGCTCTTTCATTCACCACCCTGTCTGCTGCGGTAGACCGACTCAATGAGGTCTTGACGGGAACCACTATTGGAACTAATGGTGGTAGTCCCGCCGCTAACGCTCCTACCGCGTCCAGTGCTACTACTTTCGAGATTTACGGAGATCGAATTACCGAGACTGGGTCTGGTTCTACCCTGGGTTATACCTCAACCGCTGACGGTGACAACTTTGACACCTCCAACGGTATCTTGTCCGTTCAGTCTATTTCTGAGGCTGGTGAGTTCTTTGAGTTTTCGCAGGACTCTGGCGACTGGACCAATACAGTAGGTCTGACCTTTGGCTTGTTTGACGAAACCACCTACGACCGTTCTGACTTGGAAGTTGACGCTCCTAGTAACTCCGTCAAGGCAGTTATCCGTCTTCGTGTTAAGAACAGTGGACTTATTTTCAAGGATCCCGGTTCCACCTATGGTCGCCTGAATGAGTCTGGTCTCCATAACGAACTTGATACTCGTACCACCTTCCGCGTCGGTCTGGACGGCGAACGTCGTGGGTACGTCGCTTTCCTGCTCCCCACCGGTCTCTATGAGGTAGTAGGCCGCACTGAGACCGCTATTGCTTCTGGTACAGAACTTAAGTTCGTTGCCATCCTGCCGCTGGCTAACGAGATGAACGGTGTTCGCAATATGACCGTTAACACCTTGATTCCAGGCGCCCCAATCCTGACCTGGTACTATATTGAATCTCCTGACGGTTCATTCCACTACCCCTTATTTGCAACCGCTGCTGAGGCGAACTTTGTAGATGAGCAGTATGGTACTGCTGGCACCGGCCTTGGTTCTTCCCACCAAGAACTTTTCGTAGACGAACAACCTTCCCAGAATATCTGGTTTATGCCAGACACCTTCGCGTTCGAGGATGAGTCGTCGGCCCCGACGAGTCCTGTAGGTGTACCCTGGAATGAAATTCAGACAGGAGACGACGCAAACTACATTCCCGCGGCCTACGTTGACAACACTGTAACTGTTGACGAGGGGGCGACAATCAACCTGGAAATCAAACCCTCTGGAGATTCCGCAACTTACAACGTGACAGGGGTACCCTCTGGACTTGCCTTCGATGGTTCCTACCTGACTGGTACCGCCCCCGAGGTTGCTGACAACAACGTCAATAACCCAAACGACACTTTTACCATTACAGTTACGAAGGCTAACAACTATGGTTCATCTGTAGGCACGTTGACTCTTGTCGTCAACAATTTGACACTACCCGCCACTGCTTTAAGTGGGTTTACCTGGGATAATACCTCCACCACCCTTGTGGATGAATTCACCATGGGAGAAGGTTCTGTCGTAACTATGGACGATACTCTTCAGGACGGTAAGCGTTTCGTTATTGACGAGGCGTGGGTCGAGACTAACGTCTTGCCCAACCTGCTGGCCGATGGCGACGAAGTAATTATCGGTGTTGCCGCTAGTGGTGCTAACTGGACATCAATCGAAGACGCGGACTTTGACTTCTACATGAGTTGGAGACGCAACGCTACAAATCAGATTATCTCAAACCTTTATGATGGTTCTGACGACGAGCTTGTAATTAACAGCCTGACAGATGCCTACTATGATTATGGTTTTGAGGTTAATGGTACCACCGTTTACCTAATCGCCTGCAACGTTGGTGACCTAAACAGCGAACCGTCTCCTGCTCTCGGTGGTAACTTTGTAAGGGTCAAAACTATCGCTAGTTACAGTGGCACGATTCCCTTGACCCTGACAATGGCAACGATTTCGGCAGAGGCTGGTCTGAGCACTTCTGGAATTGCTGAAATTGACACCCCACTTCCGACTGGCAATCTCACGGACTGGAACAAGGCGATTGTTTTCTCAGGAAATACCGAGCGAACATATCAGTTTGACTTCACCGAAACTTTCAACCCCATACAGATGGCTCGCACGAGTCAACTGGTGTCGGCACCGTCCACGACTGGTAACACTGTCTCCACTGGACACCCTTGGGCTACCACTGTTGTCTTCCGCACTGACGGCAATGCCAGCGACCAATACATCTGGACTCAGGGTGAAGGTACAGCATCTACGAATGACAACATCTACCTACGCCTAGACTCCAACGGAGCCATGTACTTTGGTTGGGGTCGCCAGGGTGACTTGAATGAAGTTGTTATTGGTAACGGTTTTACTCAATCTAGTGCTACTAGCCAATGGTACGGCGTATACATTGCTCATAACGGCACCCGCCTCAGTGCTACCGATGCAACTGCCGCCAACTTAGCAGCAGCCTTTGATATTCGTATTATGAAGTTCTTCAACCCAACCGGTTGGGATTTCGTGGGTGCTAACGGTAGTTTTGCTGACTCAGTTGGCAACCGCAGTACTGTGACTAACTGGAACCGTGGTGGCAGTACCGTTGGTGGCCGCATGGACCGCATATACTCTGGTGGATTCTATGTCGGCGGCAGCACCGGTGCAAACAAGAGTTTCCACGGCAAGGTTGCCTCCATGGTTGTCACGACCCTGCGTCAAGGTGTGTCTATGCCCTCGGATGCTGAAATTCTGGAGATGACTACCGACCCAATGCGATGGCTGAGCACTTACAAAGCTGGCAACAATTATCGCTCTGCTGGAGGCACCAGCGAAACTGCCACCTTTACTTTAGGCAACACTTTCTCTGGCTGGGCTACTCATGTTTGGTTGATGGGTGACGGCAATACTGATACGTTCCCTGATATTAGGAACCAGGTTCAGGTTAATGACAACTACACGAAGTTGGTTATGACTTCCATGGTCGCTGGTGACATTCAAACGGTGAACATCGCCGGACTCACCTGA

Genome Context

Tertiary structure

WVQ00233.1
ColabFold structure
Source ColabFold
pLDDT 28.8
Oligomeric state monomer
Download structure