Protein

View in Explore
Genbank accession
AWN09165.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,41
Protein sequence
MKTYPYDPRGINPECQFTEERIIDSDDPKDRVVMLDHRPFFEGLEVKLAGASIPLTRGKDYELEYALTPLDDSVTTPVFCGVQLINPDLRGAVVFTGQMLGGTFYSGLIEMLDELVKALNNPTSADWLLLDGRPSLYPATPSATSWADMLNKKYVASAVHDVELDAGAANDAIREKLAALKDEVIALGVEIEAFNYPAHIAATNPHDTTVAQNGAHPVDLKTPDTFLAYGKNLRTLTAEIRALGLQQSDIDKYISKWVSKESKGVFTAAISGTRALFRSPNGESEITFSTDAFTLKSNGSIILATGYMPGDTVTRFMEWKAGVNTLRIESTGSALGMDRLTLNGTTLLTTTALMGYQQDPGTGGGTVDPDDNKLYIEGRNGITFTGKGSKADPVTGTVTATKATTTAAGVVKLKKGPGTETSGVAATPDSLTTYEGDLSSYVLKATLLNNKAMTDGSRVLTKTDLGLGNADNTADLDKPLSDALAEAVTGLSPKGHHHDWSELAIPTASQTTLGIARYSNNQAGLAAGRGVTPNVLNELVKRLDVVAGMLASAKENTVTEFAAVRGKTWTVGASRTTLAVTDLNYFYLFDGQRKEGTVSGSIDLQTTPMFQWFSPDNQMERTWQNAVINSGAGVSYTGFEAPFPFNTPRGSQIGLTLNGMGNLSVVTVLAKTRLHCVTGKLKIWVSGGGAVTVYVDGEIVGAGLTQPAYLEVNVTAGWEEHCLAIKAECNDAAKAAAVRFEVSDGDYPLYASGTHTKVAVLQEFVTPMTNLRHYLYVNMITSALYSRAEPILDPLMNLERGYIGYIDVPSTGLVAGDTYTFDTTFDYGPSSELNAHFDVRKAHGVVKSDWSLTDNLRMLPLNKLDPLPTQWVFAKTRSNTSGSHLSRLDRGLFSYHFVSDTQATLDVQLFVANKYKTPYCWFTPYNPKEGNQATFEGSIVVDVESTEQLTDNNRQITFMALAKANSNTAAHRVLGWQSADNALTYGVIDNLATGSVGHNSKRLTTTTSPIAITPTVIKDTTVTNAAALDYYLDNYALPAYITPGCRWLLRYRYIVETRTLRLSVLSTAPDVATIRVQELEYVLPFDAVDYFDGEALGVEVQGIGVNEYVTVNHGLVEPKTTEVDISRFHYLRSLLESYIDRRTDTTASGFEDYTSKLVSVKNFGDNLDYPVTEYIVLPSTGEGYPDISHRGQLPLPFHRRMVNRGAAMPGMPSGYTWKGGVWKNGLILSYRPTRSDEYVTRVNVTMNSNYPGYIVVGSVADPKNTVAFNGTGTDEVNYVELGAKKPQQRVFIVFTPPAGEVPPLNATFTVTGINQLGNTTFIMRDTVSLDMRCGGDVLQLEKRNPYHITSAVWTWLLSVLATERQSAGNNSGEWAS
Physico‐chemical
properties
protein length:1376 AA
molecular weight: 149584,67200 Da
isoelectric point:5,31401
aromaticity:0,08866
hydropathy:-0,19608

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AWN09165.1
1 1376 aa
Domain Start End Length (AA) Confidence
N-terminal 1 568 568 0,9760
Central domain 569 1037 470 0,8833
C-terminal 1038 1376 338 0,3593
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage SPAsTU [NCBI] · taxon 2136797
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Salmonella enterica [NCBI] · taxon 28901
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
AWN09165.1 [NCBI]
Genbank nucleotide accession
MH221129 [NCBI]
CDS location
range 224498 -> 228628
strand +
CDS
ATGAAAACGTATCCTTACGATCCTCGGGGCATTAATCCCGAGTGTCAATTCACTGAGGAACGTATCATCGACTCCGACGATCCTAAAGACCGGGTGGTGATGCTTGATCATCGCCCGTTTTTTGAAGGTCTCGAGGTAAAGCTCGCCGGTGCATCCATTCCGTTGACACGCGGAAAGGACTATGAACTGGAATACGCGCTGACACCGTTGGATGATTCGGTGACGACCCCCGTGTTTTGTGGGGTGCAACTTATTAACCCTGATTTACGCGGGGCAGTGGTCTTTACAGGCCAGATGCTCGGGGGTACGTTTTACAGCGGCTTAATTGAAATGCTTGACGAGTTGGTCAAAGCATTGAACAACCCAACGTCTGCGGATTGGCTGCTGTTGGATGGACGACCATCGCTATATCCGGCGACTCCATCTGCCACCTCTTGGGCGGATATGCTCAACAAAAAGTACGTCGCTTCTGCGGTGCATGATGTTGAGTTAGATGCCGGTGCGGCTAACGACGCCATCCGTGAAAAATTAGCCGCGTTGAAAGACGAAGTTATTGCGTTGGGTGTGGAGATTGAAGCCTTCAACTACCCAGCGCATATTGCGGCGACCAATCCGCACGATACCACTGTCGCGCAGAATGGTGCTCACCCTGTAGACCTGAAAACCCCGGATACGTTCCTGGCTTACGGGAAGAATCTCCGTACATTAACCGCTGAGATTCGGGCGCTCGGGTTACAGCAGTCTGATATCGACAAGTACATCTCTAAATGGGTATCGAAAGAATCCAAAGGGGTGTTCACTGCCGCGATTAGTGGCACGCGCGCGCTGTTCCGTTCACCGAATGGGGAATCGGAGATTACGTTCTCGACCGACGCGTTTACGTTGAAGTCTAACGGATCGATTATCCTCGCTACCGGGTATATGCCTGGCGATACGGTTACACGGTTCATGGAGTGGAAAGCGGGCGTCAATACCCTGCGTATCGAATCCACGGGTTCTGCGTTGGGAATGGACCGTTTGACACTCAACGGGACGACGCTGCTGACAACCACCGCGTTGATGGGGTATCAGCAAGACCCTGGTACTGGCGGTGGTACAGTCGACCCTGACGATAATAAGCTGTATATCGAAGGGCGTAACGGCATCACCTTTACTGGTAAAGGGTCAAAAGCTGACCCTGTAACCGGCACGGTGACTGCGACGAAGGCAACCACTACTGCAGCGGGTGTGGTGAAACTGAAGAAGGGGCCGGGTACTGAAACGTCCGGCGTTGCGGCGACCCCTGATTCGCTGACTACGTACGAAGGTGACTTGTCATCCTACGTGTTAAAAGCCACCCTGTTAAACAACAAAGCGATGACCGACGGTTCTCGTGTGTTAACGAAAACTGACCTGGGCCTGGGTAACGCGGATAATACCGCCGACCTTGATAAGCCTCTGTCGGATGCGCTGGCTGAAGCGGTAACTGGTCTTAGCCCGAAAGGGCACCACCACGATTGGTCGGAGCTTGCAATTCCAACCGCCTCACAAACCACTCTGGGTATTGCTCGTTACTCAAACAACCAAGCTGGCTTAGCCGCAGGTCGTGGGGTAACTCCTAACGTACTCAACGAGCTGGTTAAGCGTCTGGACGTGGTGGCAGGTATGCTGGCCAGTGCGAAGGAAAATACAGTTACTGAGTTTGCTGCTGTACGTGGCAAGACCTGGACTGTGGGGGCTTCGAGAACCACTTTAGCGGTCACTGACCTGAACTACTTTTATCTGTTCGATGGGCAGAGAAAAGAAGGGACGGTGTCGGGGTCGATTGATCTGCAAACCACACCAATGTTCCAATGGTTCTCTCCGGATAACCAGATGGAGCGTACGTGGCAGAATGCAGTAATCAACTCCGGGGCGGGGGTGAGCTATACCGGGTTTGAAGCGCCCTTCCCGTTCAATACCCCCAGAGGCTCTCAGATTGGCTTGACACTCAACGGCATGGGCAACCTGTCCGTTGTAACGGTGTTGGCGAAAACACGCTTACATTGCGTTACAGGCAAGCTGAAGATATGGGTAAGCGGTGGTGGGGCAGTAACCGTATACGTAGATGGGGAAATCGTAGGGGCTGGGTTAACTCAACCTGCTTATCTCGAGGTGAACGTAACGGCAGGATGGGAAGAACATTGCTTAGCGATTAAAGCGGAATGTAACGATGCAGCAAAAGCAGCAGCGGTTCGTTTCGAAGTCAGCGACGGCGATTACCCACTGTACGCCTCCGGAACACACACCAAGGTTGCTGTGTTGCAAGAGTTCGTTACGCCGATGACCAATCTGCGTCACTACCTCTACGTAAACATGATTACCAGTGCGCTGTATTCACGTGCGGAACCTATCCTTGACCCACTGATGAACCTGGAGCGTGGTTACATCGGTTATATCGATGTGCCGAGTACCGGGTTAGTGGCTGGAGATACGTATACGTTCGACACCACTTTTGACTACGGACCTTCATCCGAGTTGAATGCGCATTTCGATGTTAGAAAAGCGCACGGTGTGGTGAAAAGCGATTGGTCATTAACCGATAACCTTCGGATGCTCCCACTCAACAAACTCGACCCGTTGCCTACGCAGTGGGTGTTTGCTAAGACACGTTCGAATACGTCGGGTAGCCATCTGTCTCGTCTTGACCGCGGGTTGTTCAGTTACCACTTCGTTTCTGACACACAAGCCACGCTGGATGTCCAGTTGTTCGTTGCCAACAAATACAAAACACCGTATTGCTGGTTTACGCCGTACAACCCAAAAGAGGGTAACCAAGCGACCTTCGAAGGGTCGATAGTAGTCGACGTCGAGAGCACCGAGCAGCTGACCGATAACAATCGTCAGATTACGTTCATGGCGCTGGCAAAAGCGAACAGCAACACTGCCGCTCACCGGGTACTCGGTTGGCAGAGTGCGGATAACGCTTTAACGTACGGGGTAATCGATAACCTGGCCACGGGCTCAGTGGGGCACAACAGTAAGCGGCTGACTACAACCACGTCACCAATTGCGATTACGCCTACGGTCATTAAAGACACAACCGTCACAAATGCCGCTGCACTGGATTATTATCTTGACAACTATGCATTACCTGCGTATATCACGCCGGGATGTCGTTGGTTGCTGAGATACCGTTACATTGTGGAAACAAGAACGCTCCGCTTGTCGGTGCTGTCTACGGCTCCAGACGTGGCAACTATCCGTGTGCAGGAGCTGGAATATGTCTTACCGTTTGATGCGGTGGACTATTTCGATGGTGAAGCGTTGGGTGTGGAAGTGCAAGGTATCGGGGTCAATGAATACGTGACGGTTAACCACGGTTTAGTAGAACCTAAAACGACCGAGGTAGACATCTCACGTTTCCATTACCTGCGTTCGTTGTTAGAGTCGTACATCGATCGTAGAACCGATACAACGGCGAGTGGGTTCGAAGACTACACCTCGAAACTGGTGAGCGTCAAGAACTTTGGTGACAACCTCGATTACCCGGTTACGGAGTATATTGTGTTGCCGTCAACCGGTGAAGGTTATCCTGACATCTCGCATCGTGGTCAACTGCCACTACCTTTCCATCGTCGGATGGTTAATCGTGGTGCAGCAATGCCGGGAATGCCGTCAGGCTACACCTGGAAAGGGGGTGTGTGGAAGAATGGGTTGATATTATCTTATCGTCCAACGCGTAGTGACGAGTATGTCACCAGAGTTAATGTGACGATGAATTCTAACTACCCAGGCTACATCGTCGTCGGTTCAGTGGCTGACCCGAAAAATACGGTGGCCTTTAATGGCACCGGTACGGACGAGGTTAACTACGTTGAACTCGGCGCGAAAAAACCACAGCAGCGTGTTTTCATTGTCTTTACACCGCCTGCAGGTGAAGTACCACCACTGAACGCTACGTTCACCGTGACGGGTATTAACCAGCTAGGTAACACCACCTTTATCATGCGTGACACAGTTTCCCTGGACATGCGTTGCGGTGGGGATGTATTGCAGTTGGAGAAACGCAACCCGTACCACATCACGAGCGCGGTGTGGACATGGCTGTTGAGTGTATTGGCAACGGAACGCCAAAGTGCAGGCAACAACTCGGGTGAGTGGGCCTCTTAG

Genome Context

Tertiary structure

AWN09165.1
ColabFold structure
Source ColabFold
pLDDT 70.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence for lytic Bacteriophages STsAS and SPAsTU against Salmonella enterica serovar Typhi and Paratyphi A Sanirbandha,C., Yukgehnaish,K., Sivachandran,P., Lee,S.Y., Lalitha,P. and Ravichandran,M. — — GenBank