Protein

View in Explore
Genbank accession
AWN09165.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,61
Protein sequence
MKTYPYDPRGINPECQFTEERIIDSDDPKDRVVMLDHRPFFEGLEVKLAGASIPLTRGKDYELEYALTPLDDSVTTPVFCGVQLINPDLRGAVVFTGQMLGGTFYSGLIEMLDELVKALNNPTSADWLLLDGRPSLYPATPSATSWADMLNKKYVASAVHDVELDAGAANDAIREKLAALKDEVIALGVEIEAFNYPAHIAATNPHDTTVAQNGAHPVDLKTPDTFLAYGKNLRTLTAEIRALGLQQSDIDKYISKWVSKESKGVFTAAISGTRALFRSPNGESEITFSTDAFTLKSNGSIILATGYMPGDTVTRFMEWKAGVNTLRIESTGSALGMDRLTLNGTTLLTTTALMGYQQDPGTGGGTVDPDDNKLYIEGRNGITFTGKGSKADPVTGTVTATKATTTAAGVVKLKKGPGTETSGVAATPDSLTTYEGDLSSYVLKATLLNNKAMTDGSRVLTKTDLGLGNADNTADLDKPLSDALAEAVTGLSPKGHHHDWSELAIPTASQTTLGIARYSNNQAGLAAGRGVTPNVLNELVKRLDVVAGMLASAKENTVTEFAAVRGKTWTVGASRTTLAVTDLNYFYLFDGQRKEGTVSGSIDLQTTPMFQWFSPDNQMERTWQNAVINSGAGVSYTGFEAPFPFNTPRGSQIGLTLNGMGNLSVVTVLAKTRLHCVTGKLKIWVSGGGAVTVYVDGEIVGAGLTQPAYLEVNVTAGWEEHCLAIKAECNDAAKAAAVRFEVSDGDYPLYASGTHTKVAVLQEFVTPMTNLRHYLYVNMITSALYSRAEPILDPLMNLERGYIGYIDVPSTGLVAGDTYTFDTTFDYGPSSELNAHFDVRKAHGVVKSDWSLTDNLRMLPLNKLDPLPTQWVFAKTRSNTSGSHLSRLDRGLFSYHFVSDTQATLDVQLFVANKYKTPYCWFTPYNPKEGNQATFEGSIVVDVESTEQLTDNNRQITFMALAKANSNTAAHRVLGWQSADNALTYGVIDNLATGSVGHNSKRLTTTTSPIAITPTVIKDTTVTNAAALDYYLDNYALPAYITPGCRWLLRYRYIVETRTLRLSVLSTAPDVATIRVQELEYVLPFDAVDYFDGEALGVEVQGIGVNEYVTVNHGLVEPKTTEVDISRFHYLRSLLESYIDRRTDTTASGFEDYTSKLVSVKNFGDNLDYPVTEYIVLPSTGEGYPDISHRGQLPLPFHRRMVNRGAAMPGMPSGYTWKGGVWKNGLILSYRPTRSDEYVTRVNVTMNSNYPGYIVVGSVADPKNTVAFNGTGTDEVNYVELGAKKPQQRVFIVFTPPAGEVPPLNATFTVTGINQLGNTTFIMRDTVSLDMRCGGDVLQLEKRNPYHITSAVWTWLLSVLATERQSAGNNSGEWAS
Physico‐chemical
properties
protein length:1376 AA
molecular weight: 149584,67200 Da
isoelectric point:5,31401
aromaticity:0,08866
hydropathy:-0,19608

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPAsTU
[NCBI] 		2136797 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWN09165.1 [NCBI]
Genbank nucleotide accession
MH221129 [NCBI]
CDS location
range 224498 -> 228628
strand +
CDS
ATGAAAACGTATCCTTACGATCCTCGGGGCATTAATCCCGAGTGTCAATTCACTGAGGAACGTATCATCGACTCCGACGATCCTAAAGACCGGGTGGTGATGCTTGATCATCGCCCGTTTTTTGAAGGTCTCGAGGTAAAGCTCGCCGGTGCATCCATTCCGTTGACACGCGGAAAGGACTATGAACTGGAATACGCGCTGACACCGTTGGATGATTCGGTGACGACCCCCGTGTTTTGTGGGGTGCAACTTATTAACCCTGATTTACGCGGGGCAGTGGTCTTTACAGGCCAGATGCTCGGGGGTACGTTTTACAGCGGCTTAATTGAAATGCTTGACGAGTTGGTCAAAGCATTGAACAACCCAACGTCTGCGGATTGGCTGCTGTTGGATGGACGACCATCGCTATATCCGGCGACTCCATCTGCCACCTCTTGGGCGGATATGCTCAACAAAAAGTACGTCGCTTCTGCGGTGCATGATGTTGAGTTAGATGCCGGTGCGGCTAACGACGCCATCCGTGAAAAATTAGCCGCGTTGAAAGACGAAGTTATTGCGTTGGGTGTGGAGATTGAAGCCTTCAACTACCCAGCGCATATTGCGGCGACCAATCCGCACGATACCACTGTCGCGCAGAATGGTGCTCACCCTGTAGACCTGAAAACCCCGGATACGTTCCTGGCTTACGGGAAGAATCTCCGTACATTAACCGCTGAGATTCGGGCGCTCGGGTTACAGCAGTCTGATATCGACAAGTACATCTCTAAATGGGTATCGAAAGAATCCAAAGGGGTGTTCACTGCCGCGATTAGTGGCACGCGCGCGCTGTTCCGTTCACCGAATGGGGAATCGGAGATTACGTTCTCGACCGACGCGTTTACGTTGAAGTCTAACGGATCGATTATCCTCGCTACCGGGTATATGCCTGGCGATACGGTTACACGGTTCATGGAGTGGAAAGCGGGCGTCAATACCCTGCGTATCGAATCCACGGGTTCTGCGTTGGGAATGGACCGTTTGACACTCAACGGGACGACGCTGCTGACAACCACCGCGTTGATGGGGTATCAGCAAGACCCTGGTACTGGCGGTGGTACAGTCGACCCTGACGATAATAAGCTGTATATCGAAGGGCGTAACGGCATCACCTTTACTGGTAAAGGGTCAAAAGCTGACCCTGTAACCGGCACGGTGACTGCGACGAAGGCAACCACTACTGCAGCGGGTGTGGTGAAACTGAAGAAGGGGCCGGGTACTGAAACGTCCGGCGTTGCGGCGACCCCTGATTCGCTGACTACGTACGAAGGTGACTTGTCATCCTACGTGTTAAAAGCCACCCTGTTAAACAACAAAGCGATGACCGACGGTTCTCGTGTGTTAACGAAAACTGACCTGGGCCTGGGTAACGCGGATAATACCGCCGACCTTGATAAGCCTCTGTCGGATGCGCTGGCTGAAGCGGTAACTGGTCTTAGCCCGAAAGGGCACCACCACGATTGGTCGGAGCTTGCAATTCCAACCGCCTCACAAACCACTCTGGGTATTGCTCGTTACTCAAACAACCAAGCTGGCTTAGCCGCAGGTCGTGGGGTAACTCCTAACGTACTCAACGAGCTGGTTAAGCGTCTGGACGTGGTGGCAGGTATGCTGGCCAGTGCGAAGGAAAATACAGTTACTGAGTTTGCTGCTGTACGTGGCAAGACCTGGACTGTGGGGGCTTCGAGAACCACTTTAGCGGTCACTGACCTGAACTACTTTTATCTGTTCGATGGGCAGAGAAAAGAAGGGACGGTGTCGGGGTCGATTGATCTGCAAACCACACCAATGTTCCAATGGTTCTCTCCGGATAACCAGATGGAGCGTACGTGGCAGAATGCAGTAATCAACTCCGGGGCGGGGGTGAGCTATACCGGGTTTGAAGCGCCCTTCCCGTTCAATACCCCCAGAGGCTCTCAGATTGGCTTGACACTCAACGGCATGGGCAACCTGTCCGTTGTAACGGTGTTGGCGAAAACACGCTTACATTGCGTTACAGGCAAGCTGAAGATATGGGTAAGCGGTGGTGGGGCAGTAACCGTATACGTAGATGGGGAAATCGTAGGGGCTGGGTTAACTCAACCTGCTTATCTCGAGGTGAACGTAACGGCAGGATGGGAAGAACATTGCTTAGCGATTAAAGCGGAATGTAACGATGCAGCAAAAGCAGCAGCGGTTCGTTTCGAAGTCAGCGACGGCGATTACCCACTGTACGCCTCCGGAACACACACCAAGGTTGCTGTGTTGCAAGAGTTCGTTACGCCGATGACCAATCTGCGTCACTACCTCTACGTAAACATGATTACCAGTGCGCTGTATTCACGTGCGGAACCTATCCTTGACCCACTGATGAACCTGGAGCGTGGTTACATCGGTTATATCGATGTGCCGAGTACCGGGTTAGTGGCTGGAGATACGTATACGTTCGACACCACTTTTGACTACGGACCTTCATCCGAGTTGAATGCGCATTTCGATGTTAGAAAAGCGCACGGTGTGGTGAAAAGCGATTGGTCATTAACCGATAACCTTCGGATGCTCCCACTCAACAAACTCGACCCGTTGCCTACGCAGTGGGTGTTTGCTAAGACACGTTCGAATACGTCGGGTAGCCATCTGTCTCGTCTTGACCGCGGGTTGTTCAGTTACCACTTCGTTTCTGACACACAAGCCACGCTGGATGTCCAGTTGTTCGTTGCCAACAAATACAAAACACCGTATTGCTGGTTTACGCCGTACAACCCAAAAGAGGGTAACCAAGCGACCTTCGAAGGGTCGATAGTAGTCGACGTCGAGAGCACCGAGCAGCTGACCGATAACAATCGTCAGATTACGTTCATGGCGCTGGCAAAAGCGAACAGCAACACTGCCGCTCACCGGGTACTCGGTTGGCAGAGTGCGGATAACGCTTTAACGTACGGGGTAATCGATAACCTGGCCACGGGCTCAGTGGGGCACAACAGTAAGCGGCTGACTACAACCACGTCACCAATTGCGATTACGCCTACGGTCATTAAAGACACAACCGTCACAAATGCCGCTGCACTGGATTATTATCTTGACAACTATGCATTACCTGCGTATATCACGCCGGGATGTCGTTGGTTGCTGAGATACCGTTACATTGTGGAAACAAGAACGCTCCGCTTGTCGGTGCTGTCTACGGCTCCAGACGTGGCAACTATCCGTGTGCAGGAGCTGGAATATGTCTTACCGTTTGATGCGGTGGACTATTTCGATGGTGAAGCGTTGGGTGTGGAAGTGCAAGGTATCGGGGTCAATGAATACGTGACGGTTAACCACGGTTTAGTAGAACCTAAAACGACCGAGGTAGACATCTCACGTTTCCATTACCTGCGTTCGTTGTTAGAGTCGTACATCGATCGTAGAACCGATACAACGGCGAGTGGGTTCGAAGACTACACCTCGAAACTGGTGAGCGTCAAGAACTTTGGTGACAACCTCGATTACCCGGTTACGGAGTATATTGTGTTGCCGTCAACCGGTGAAGGTTATCCTGACATCTCGCATCGTGGTCAACTGCCACTACCTTTCCATCGTCGGATGGTTAATCGTGGTGCAGCAATGCCGGGAATGCCGTCAGGCTACACCTGGAAAGGGGGTGTGTGGAAGAATGGGTTGATATTATCTTATCGTCCAACGCGTAGTGACGAGTATGTCACCAGAGTTAATGTGACGATGAATTCTAACTACCCAGGCTACATCGTCGTCGGTTCAGTGGCTGACCCGAAAAATACGGTGGCCTTTAATGGCACCGGTACGGACGAGGTTAACTACGTTGAACTCGGCGCGAAAAAACCACAGCAGCGTGTTTTCATTGTCTTTACACCGCCTGCAGGTGAAGTACCACCACTGAACGCTACGTTCACCGTGACGGGTATTAACCAGCTAGGTAACACCACCTTTATCATGCGTGACACAGTTTCCCTGGACATGCGTTGCGGTGGGGATGTATTGCAGTTGGAGAAACGCAACCCGTACCACATCACGAGCGCGGTGTGGACATGGCTGTTGAGTGTATTGGCAACGGAACGCCAAAGTGCAGGCAACAACTCGGGTGAGTGGGCCTCTTAG

Tertiary structure

PDB ID
aab5d417d5001e1c351ed66be3204d1eff335f0e6096cec57c3163348c98f54b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6967
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence for lytic Bacteriophages STsAS and SPAsTU against Salmonella enterica serovar Typhi and Paratyphi A Sanirbandha,C., Yukgehnaish,K., Sivachandran,P., Lee,S.Y., Lalitha,P. and Ravichandran,M. — — GenBank