Protein

View in Explore
Genbank accession
YP_009845962.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MADIQLKYLQDLEAAGGVAATDLMHVSQSGLDRSVTVSVLMRFMTDAFFPVGSVMLRSDAKNPNTMLPGTTWVRLAAGRNIRIAAENGSDVLNIGGADDVTLTGNNLPSHSHAFQNGATNQAGNHTHNVWTGNSGSHTHGAYTDAQGNHAHRAWTDAQGQHQHGVGIRNPSNYGGSGGYYGVRGIGLGSGAWAQGGGQTGSESLTSADGNHSHNVGMDAAGNHGHNITVNAVGDHAHAAAMDERGAHTHTVTGTIGSTGNNASFSVVNAYVNLAAWRRTQ
Physico‐chemical
properties
protein length:280 AA
molecular weight: 29020,20410 Da
isoelectric point:6,41544
aromaticity:0,05714
hydropathy:-0,41250

Domains

Domains [InterPro]
IPR053827
44–152
IPR053827
YP_009845962.1
1 280
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_PSKM
[NCBI] 		2588094 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009845962.1 [NCBI]
Genbank nucleotide accession
NC_048767 [NCBI]
CDS location
range 22572 -> 23414
strand +
CDS
ATGGCTGATATTCAACTAAAGTACCTACAGGATCTTGAGGCCGCTGGCGGAGTTGCGGCTACGGACCTGATGCACGTAAGCCAATCAGGCTTAGACAGATCCGTTACCGTGTCAGTGCTGATGCGGTTTATGACTGATGCGTTTTTCCCGGTAGGCTCCGTCATGCTGAGATCTGACGCGAAGAACCCTAATACGATGCTACCCGGCACGACTTGGGTTAGGCTGGCGGCTGGTCGCAATATCAGGATCGCCGCTGAGAATGGCTCAGACGTTCTCAACATCGGCGGGGCTGATGATGTTACTTTGACCGGCAACAACCTTCCATCGCACAGCCACGCATTCCAAAACGGTGCGACAAACCAGGCCGGGAACCACACGCACAACGTTTGGACAGGTAACTCAGGGAGCCACACTCACGGCGCATACACTGATGCGCAGGGCAACCACGCGCACCGGGCATGGACTGATGCGCAAGGGCAGCACCAACACGGCGTTGGTATCCGTAACCCGTCGAACTACGGCGGATCAGGCGGTTACTATGGCGTGAGGGGTATTGGTCTCGGATCTGGTGCTTGGGCGCAGGGCGGGGGCCAGACAGGAAGCGAATCACTGACCAGCGCCGATGGAAACCACTCGCACAACGTCGGGATGGATGCGGCCGGTAACCACGGTCATAACATCACTGTGAACGCAGTTGGCGATCACGCTCACGCAGCGGCGATGGATGAGCGAGGCGCGCACACTCACACGGTTACAGGTACGATTGGCAGTACCGGTAATAATGCGTCGTTCTCAGTTGTTAACGCTTATGTTAATCTAGCGGCCTGGCGACGTACTCAATAA

Tertiary structure

PDB ID
9e91fcbccd362dfd2903a71e758ad14c5402c0e87babbcf22d1bb3bfa181b141
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7502
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea sp. infecting bacteriophage vB_PagM_PSKM Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2012-05 — GenBank