Protein

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Genbank accession
YP_004324408.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MSNQTVTVNFAFGGSSGTIPGGARNITMQIGGARGGSGGFDSGGPGGGAGNGRFGTFSIPTSSADRGWQAFIGAVGSNGPGGSGAAVGGPGGNLAGRSTGRGGKGGDDGTSGWSGCGAGGGAASVFRLAGARVVTAGGGGGGGGGSYSCGGPQRPGGNGGGAGGFANANPSLNNGGGGANKGGGDGGGGGGGGGGHTGGGGGGAGQDCSFGGGGGGGGTSRYNASVLSLIAQGGVSGNGFGSLQYNLKVAEISYFNLNKTSIIAGQNATLSWGVIDSESQSINAGIGNVAAIDDKVVSPNATTTYILTAIGQAGNDTAQAILTVYQPVVANLRANGQNVSTSITRGQFANLDWVVTGDASSASINQGIGGVLLTSNTNVQPTLTTTYTLSASGLGGSDSDDVIVTVNQPPELAYNPPLQINYGDTLSIDFTYRYATSGVNINAIYTQRNPNTGNAVNITESISLPGTASDESGAAVTNTATFNIPWTLHGTFAVAFTATASGAGGTNPQNTSIGVVVDETPDNITIPDNLDELPLDQIAAPDESLVLSDPIVVTDIEVAAEIRSNFPIQVRFDDNDPDIESNWNDVRQI
Physico‐chemical
properties
protein length:589 AA
molecular weight: 57551,58840 Da
isoelectric point:4,28727
aromaticity:0,06112
hydropathy:-0,15144

Taxonomy

Phage
Prochlorococcus phage Syn1 [NCBI] · taxon 444861
Uroviricota Caudoviricetes Pantevenvirales Vellamovirus Vellamovirus syn1
Host
Synechococcus sp. WH 8101 [NCBI] · taxon 59932
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
YP_004324408.1 [NCBI]
Genbank nucleotide accession
NC_015288 [NCBI]
CDS location
range 40348 -> 42117
strand +
CDS
ATGTCAAATCAAACTGTAACTGTTAACTTTGCTTTTGGAGGATCCTCAGGAACTATTCCTGGTGGTGCTCGAAATATAACTATGCAAATTGGAGGTGCTAGAGGAGGATCTGGTGGATTTGACTCTGGTGGTCCTGGTGGTGGTGCTGGCAATGGTAGATTTGGAACATTTTCTATTCCAACATCATCAGCTGATAGAGGATGGCAAGCATTTATTGGAGCTGTAGGAAGTAATGGTCCTGGTGGATCTGGTGCTGCTGTTGGTGGTCCTGGTGGTAACTTAGCAGGTAGATCTACTGGTCGCGGCGGTAAAGGTGGTGATGATGGAACTAGTGGATGGTCTGGATGTGGAGCAGGCGGCGGAGCAGCATCTGTTTTTCGTCTTGCTGGTGCTCGCGTAGTCACCGCTGGAGGCGGTGGCGGTGGCGGTGGCGGATCTTATTCTTGTGGTGGTCCTCAACGTCCTGGAGGCAATGGAGGTGGAGCTGGTGGATTTGCTAATGCAAACCCTAGTCTCAACAATGGTGGCGGTGGTGCTAACAAAGGTGGTGGAGACGGCGGCGGAGGCGGCGGAGGCGGAGGCGGTCACACTGGTGGCGGTGGCGGTGGTGCTGGTCAGGACTGTAGCTTCGGCGGTGGTGGTGGTGGTGGAGGCACTTCTCGCTATAACGCTAGTGTTTTGTCATTAATAGCACAAGGTGGTGTTAGTGGTAATGGATTTGGATCACTTCAATATAATTTAAAAGTTGCCGAGATTAGTTATTTTAATCTGAATAAGACAAGTATTATTGCTGGTCAAAATGCAACTCTATCCTGGGGTGTAATAGATTCTGAGTCTCAAAGTATCAATGCAGGTATTGGTAATGTTGCTGCTATAGACGATAAAGTTGTTAGTCCTAATGCTACAACCACATACATATTGACTGCTATTGGTCAGGCAGGTAATGATACTGCTCAAGCAATTCTTACTGTATATCAACCAGTTGTTGCTAACTTAAGAGCAAATGGACAAAATGTTTCTACATCTATTACTAGAGGACAGTTTGCAAACCTAGATTGGGTTGTGACTGGTGATGCAAGCAGTGCATCAATCAACCAGGGTATTGGTGGAGTTTTGCTTACAAGCAATACAAATGTTCAACCAACTCTTACAACCACATATACATTATCTGCTTCTGGTCTCGGTGGATCAGACAGTGATGATGTTATTGTTACTGTGAATCAACCACCAGAATTGGCATATAATCCGCCACTACAGATTAACTATGGCGATACTTTGTCGATTGATTTTACCTACAGATATGCAACTAGTGGTGTTAATATTAATGCCATTTATACGCAAAGAAATCCAAATACAGGTAATGCTGTAAATATAACAGAAAGTATTTCTCTGCCAGGAACAGCATCCGACGAATCTGGAGCAGCAGTAACCAATACAGCAACATTTAATATTCCATGGACATTACATGGAACATTTGCTGTTGCATTTACTGCTACTGCTAGTGGTGCAGGTGGAACGAATCCCCAGAACACTAGCATTGGTGTAGTTGTCGATGAAACACCTGATAATATTACTATTCCAGATAACTTAGATGAACTACCACTTGATCAGATTGCAGCACCTGATGAGTCATTAGTTCTTAGTGATCCTATTGTAGTTACAGATATTGAAGTTGCAGCAGAGATTAGATCGAATTTTCCTATTCAAGTAAGATTTGATGATAATGATCCTGATATAGAATCTAACTGGAACGACGTTCGTCAAATCTAA

Genome Context

Tertiary structure

YP_004324408.1
ESMFold structure
Source ESMFold
pLDDT 77.2
Oligomeric state monomer
Download structure