Protein

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Genbank accession
CAB5220664.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MGSATTDRRMGLAGNTAYKTPATALAAANIVQSGEQTIGAVSVKAINAAGIPDRVLCVGQTDATTNGLWDVSTGSWTRSIDADGNYDWAQGTQVLITQGNYAFQIWNLTTANPITVGTTALAFSQSITAGNMASLAASSGSSLVGHTLGSAGATVRTVQSKLREIVSTKDFGAKADGATDDTAALLAMIAATSTGGRLYWPKGNYKYSTELRVGVSNVTMYGDGIGLTVLQPVGWIDHLLFADGTYPSAATTFYKFEVSGMTFDGVNQLAGANDTYGNGLNFNACDQINVHDCEFLNVKNQMFVSTFWSNAGSVQSSVIVRNNVFEGMRAGQTCIGIEGIGQGAVITGNTLNCSAGASGSAMQISFNGGSVTNTKSIISNNIITGPTAATSLIGIWITDNTTDLAITNNFIEGCDISIRCSSNSASTYEYLIFGNTCHNWISAGIMVFPLHASDDSETLIIGNRIKSAYASGASYGILAINGAHIAANKVSSGTTGIAVGGSGCVVVSNRITGVSGYSIDAGTSTAAMVVGNYHTTDVNFLADTMAMGNFGFTTERWTQNYFGLSKNTSANGSPATGTWNQGDRVWNTVPSNAAGQAIGWVCVIAGTPGTWRSFGLTV
Physico‐chemical
properties
protein length:618 AA
molecular weight: 64042,64240 Da
isoelectric point:5,25098
aromaticity:0,08414
hydropathy:0,08155

Domains

Domains [InterPro]
IPR024535
166–352
IPR024535 IPR006626 IPR006626 IPR006626
IPR012334
166–590
IPR012334
IPR011050
174–445
IPR011050
IPR006626
315–339
IPR006626 IPR006626 IPR011050
CAB5220664.1
1 618
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5220664.1 [NCBI]
Genbank nucleotide accession
LR798286 [NCBI]
CDS location
range 20375 -> 22231
strand +
CDS
ATGGGATCAGCAACTACAGACCGCCGCATGGGCCTAGCCGGCAACACGGCCTACAAGACACCAGCTACTGCCCTGGCAGCTGCCAACATCGTTCAATCTGGTGAGCAGACTATCGGCGCCGTTTCCGTCAAGGCAATCAATGCGGCGGGCATTCCGGATCGCGTGCTGTGCGTGGGGCAGACCGATGCAACCACCAATGGGCTGTGGGACGTCAGCACAGGATCCTGGACCAGGTCAATTGATGCTGACGGCAATTACGATTGGGCGCAGGGCACACAGGTGCTTATCACCCAGGGCAATTACGCCTTCCAGATTTGGAATTTGACGACAGCGAACCCGATCACTGTCGGAACCACTGCGCTGGCCTTCAGTCAATCGATCACTGCCGGCAATATGGCATCCCTGGCTGCATCATCTGGATCCTCTTTAGTCGGGCATACGCTGGGCAGTGCTGGAGCCACCGTGCGCACGGTTCAAAGCAAGCTGCGCGAGATTGTCAGTACAAAGGACTTTGGTGCAAAGGCGGACGGCGCAACTGATGACACCGCGGCACTACTGGCGATGATTGCCGCTACGAGCACCGGGGGCCGGTTGTATTGGCCAAAGGGAAACTACAAGTACTCCACCGAGCTCCGCGTCGGTGTTTCAAATGTGACGATGTACGGCGATGGAATTGGCCTCACGGTCTTGCAGCCAGTGGGGTGGATCGATCACTTGTTATTTGCTGACGGCACATACCCAAGTGCTGCCACTACATTTTATAAATTCGAAGTCAGCGGCATGACTTTTGATGGCGTCAATCAGTTGGCTGGTGCGAACGACACCTATGGCAACGGTTTGAATTTCAATGCCTGTGACCAGATCAACGTGCATGACTGCGAGTTTCTTAACGTCAAGAATCAGATGTTTGTATCGACCTTCTGGTCGAATGCTGGATCGGTCCAGTCCAGTGTCATTGTCAGGAATAACGTATTCGAAGGAATGCGCGCTGGTCAAACCTGTATCGGCATCGAAGGCATAGGCCAAGGGGCAGTGATCACGGGCAACACTTTGAACTGCTCGGCGGGTGCTTCCGGCAGTGCAATGCAAATCAGCTTCAATGGTGGATCTGTCACAAACACCAAGTCGATTATCAGTAACAACATCATTACCGGCCCAACTGCAGCGACATCGCTGATTGGTATTTGGATAACTGATAACACGACCGATCTCGCCATCACCAATAACTTCATCGAAGGCTGTGACATTTCAATTCGATGCTCGTCGAACTCAGCATCCACTTATGAGTATTTGATCTTTGGAAACACCTGCCACAACTGGATCTCTGCCGGGATTATGGTGTTCCCGCTCCACGCCTCAGACGACAGTGAAACGCTGATTATTGGCAACCGGATTAAGTCAGCCTACGCCAGCGGAGCCTCTTACGGAATATTGGCAATCAATGGCGCACATATAGCTGCCAACAAAGTCAGCTCTGGAACTACCGGAATAGCCGTTGGTGGTTCGGGCTGCGTTGTGGTGTCGAATCGAATCACAGGGGTATCTGGATATTCCATTGACGCTGGCACATCCACTGCCGCCATGGTAGTTGGCAATTACCACACCACCGACGTCAATTTCCTTGCCGACACGATGGCAATGGGTAACTTTGGCTTCACCACTGAGCGGTGGACTCAAAACTATTTTGGACTTTCCAAGAACACTTCCGCCAATGGATCGCCTGCCACGGGTACGTGGAACCAGGGCGACCGGGTTTGGAACACCGTGCCATCCAATGCCGCAGGGCAAGCAATCGGATGGGTTTGTGTAATTGCTGGGACACCTGGAACCTGGCGCTCTTTTGGATTAACCGTATGA

Tertiary structure

PDB ID
75d74f0f6ce0be6e13ac01500ebc7206e23be4dd87bf0b94b375c6721148e46a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50