Phage RBP Database

Genbank accession

AWD90668.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,87

TF

Evidence RBPdetect2

Probability 0,52

Protein sequence

MFDPVTNSGYSYTLATGDGFSTSFTFGFTGYGVGYLNVNDVHVYVEGKEVTNTINLNDPNRVNLATAPALGAIILIRRIQPLDRVYSDFERGNVYNKDQINNSFLNQLYIAHQFLDGFFDGGDNDDGDEVATGNLNMRGFRIYNLAKNSNDPTEAARLDRLMSLEDVVSGFENSLTDLKLTSIPWSPPVAVQGQTTFVSPSGVVNPVVWVNGVLQDPIKGDFTVNKAERSIIFAEPLDAGDRVFAMLGDPIADVRAYSMSSYARVWWPANGFRPKLTDGSTIVTHRPQGRIESPAHAFFSDKVRSCVAVVITPPDMPVATGVEMRFMVSGENAGNTRWRIETVLQGPGEFKEDFTNPVEFTVAVRPADVTHYRAIFPFPAADITQVLYVRVSRVPTHPEDTLALTSEDAFFLGIALDYVAE

Physico‐chemical properties

protein length:	421 AA
molecular weight:	46379,46240 Da
isoelectric point:	4,74187
aromaticity:	0,10926
hydropathy:	-0,13325

Domain architecture

AWD90668.1

1 421 aa

ATT 7–117 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

AWD90668.1

1421 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0041
STR

DC_0041

AWD90668.1

1421 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	7	117	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AWD90668.1

1 421 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	379	379	0,7556
Central domain	380	410	32	0,0016
C-terminal	411	421	10	0,9982

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage Nerthus [NCBI] · taxon 2163984

Uroviricota Caudoviricetes Autographivirales Colwellvirinae Nerthusvirus

Host

Pseudomonas syringae pv. avii [NCBI] · taxon 663959

Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)