Protein

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Genbank accession
AWD90668.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MFDPVTNSGYSYTLATGDGFSTSFTFGFTGYGVGYLNVNDVHVYVEGKEVTNTINLNDPNRVNLATAPALGAIILIRRIQPLDRVYSDFERGNVYNKDQINNSFLNQLYIAHQFLDGFFDGGDNDDGDEVATGNLNMRGFRIYNLAKNSNDPTEAARLDRLMSLEDVVSGFENSLTDLKLTSIPWSPPVAVQGQTTFVSPSGVVNPVVWVNGVLQDPIKGDFTVNKAERSIIFAEPLDAGDRVFAMLGDPIADVRAYSMSSYARVWWPANGFRPKLTDGSTIVTHRPQGRIESPAHAFFSDKVRSCVAVVITPPDMPVATGVEMRFMVSGENAGNTRWRIETVLQGPGEFKEDFTNPVEFTVAVRPADVTHYRAIFPFPAADITQVLYVRVSRVPTHPEDTLALTSEDAFFLGIALDYVAE
Physico‐chemical
properties
protein length:421 AA
molecular weight: 46379,46240 Da
isoelectric point:4,74187
aromaticity:0,10926
hydropathy:-0,13325

Domains

Domains [InterPro]
IPR005604
7–117
IPR005604
AWD90668.1
1 421
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Nerthus
[NCBI] 		2163984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWD90668.1 [NCBI]
Genbank nucleotide accession
MH113813.1 [NCBI]
CDS location
range 35567 -> 36832
strand +
CDS
ATGTTTGATCCCGTAACGAACAGCGGCTACAGCTACACCCTCGCCACAGGTGATGGGTTTAGCACGTCGTTCACGTTCGGGTTCACCGGGTATGGTGTCGGCTACCTCAATGTCAACGACGTGCATGTGTACGTCGAGGGCAAGGAAGTGACCAACACCATCAACCTGAATGATCCCAACCGCGTCAATCTTGCCACTGCCCCGGCCCTCGGTGCGATCATCCTGATCCGCCGCATCCAGCCGCTCGACCGTGTTTACTCGGACTTCGAGCGTGGCAACGTGTACAACAAAGACCAGATCAACAACTCGTTCCTGAACCAGTTGTACATCGCCCACCAGTTCCTTGACGGGTTCTTCGACGGCGGTGACAACGACGACGGTGACGAGGTGGCTACTGGCAACCTCAACATGCGCGGGTTCCGCATCTACAACCTCGCCAAGAACTCCAACGACCCGACCGAGGCTGCGCGTCTAGACCGCCTGATGTCGCTGGAGGACGTGGTGTCCGGGTTCGAGAACAGCCTGACCGACCTCAAGCTGACCAGCATCCCATGGTCGCCACCTGTGGCAGTCCAAGGGCAGACCACGTTCGTCTCGCCATCTGGCGTGGTGAATCCGGTCGTGTGGGTCAACGGTGTGCTGCAAGACCCGATCAAGGGCGACTTCACAGTCAACAAGGCTGAGCGCTCGATCATCTTCGCTGAGCCACTGGATGCAGGCGACCGCGTGTTTGCGATGCTGGGCGACCCGATTGCCGACGTGCGTGCATACAGCATGTCGAGCTATGCCCGAGTGTGGTGGCCAGCCAACGGGTTCCGCCCTAAGCTGACTGACGGCTCGACCATCGTTACCCACCGGCCACAGGGTCGCATCGAGTCTCCGGCTCATGCGTTTTTCTCTGACAAGGTGCGGTCGTGCGTGGCCGTGGTCATCACCCCACCTGACATGCCGGTAGCCACTGGTGTGGAGATGCGCTTCATGGTGTCTGGCGAGAACGCTGGCAACACCCGGTGGCGTATCGAGACGGTGCTGCAAGGGCCGGGCGAGTTCAAGGAGGACTTCACCAACCCGGTGGAGTTCACCGTGGCCGTCCGTCCTGCTGACGTGACCCACTACCGTGCCATCTTCCCGTTCCCCGCTGCCGACATCACTCAGGTGCTGTACGTGCGGGTGAGCCGGGTTCCAACCCACCCCGAGGATACGCTCGCGCTCACTAGCGAGGATGCGTTCTTCCTCGGCATTGCGCTCGACTATGTAGCCGAGTAA

Tertiary structure

PDB ID
42319b5b1d40073acf8ce85b8a22dee15e2d5e222f24efc26190d1dac34653cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy in agriculture - a green tech approach to combat plant pathogenic bacteria Djurhuus,A.M., Carstens,A.B. and Hansen,L.H. 1991 — GenBank