Protein

View in Explore
Genbank accession
YP_010355645.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MTYSFAPNDQPLYVSEGDYVQFRFIAPNQWNTTNTVTITIGDLTQFWLITTIPEDFTPDPFPFNDVIDADLDTMYTTDIVFRPPDGTPSTSLSGLTPDTQAAVVLGSNLGGGIDNYAMRVDYNGNGSFDTGWIQSGGAITVTNGARIRVRLKSSEFTTQFSRLTLVIGTSSARWDILTLSQPTNEPEPFPDFTDLEDQPTNTYCYSEVIRLQGLISSATINTSGNGEWAISSTSNTSTNADGFQVLSGATFTGNDGTVNNGDYLQLRILSSNNALFPVTTNLSIGDALNGDTWSVETGSNPSTNPNSFSFTNVDDAIEDTLVASDEQPATALGIQGLTDGIQVPVVLVSTNSTKVRIKKNNDSVGVFPTTAGNGDKLTLYLQSSPSFNTPLNMQIKVGDRQIPAWQVRTSLGPDTDADWSPPANRNNQIPESFVSSAPVTVTGINRPITIESIAGYPALISIDFDSPVAGPRTFDPLVNSSFYIVVQAALQLNTPETTTIRLGTGNPNQFVWQVTTYATVPPPSTDAAIWYSRKSKKFDGYPIGTVLPVLKEGVGTYGDLDGGNNDRYPGFVPCDGRSLDKNDYFELYTILAGEYGETTNEFNVPDYRNRKLCGIGIVDSTRGNSAFVPITLGSSKGINDPGAEGGYWYFNRVGARGSNPLDQVQGPPGAVGSLDSDFFSLGTVRLTGLETLTDQVIFEINPNSFVTAQVGGLSSITVAAPTHNHAYISAVTEGNEGEASIPWNQPLGRSMMAGSRYGSPNPDEFDARAPENASSQENTDAIRDAWKNFFGSTLGANFQLELTRYYGWKIQMQFEMHGKTFLAVLLVLIFS
Physico‐chemical
properties
protein length:831 AA
molecular weight: 89744,10450 Da
isoelectric point:4,32473
aromaticity:0,09988
hydropathy:-0,26534

Domains

View on InterPro
Domain architecture
YP_010355645.1
1 831 aa
ATT 533–610 · STR 611–642 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010355645.1
1 831 aa
Domain Start End Length (AA) Confidence
N-terminal 1 747 747 0,7584
Central domain 748 820 74 0,2446
C-terminal 821 831 10 0,1967
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage ACG-2014e [NCBI] · taxon 1493510
Uroviricota Caudoviricetes Pantevenvirales Chalconvirus Chalconvirus acg2014e
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
YP_010355645.1 [NCBI]
Genbank nucleotide accession
NC_062736.1 [NCBI]
CDS location
range 40740 -> 43235
strand +
CDS
ATGACATATTCGTTTGCACCTAACGATCAACCACTTTACGTATCAGAAGGTGATTACGTACAGTTTAGGTTTATTGCACCTAATCAGTGGAACACCACCAATACTGTAACTATTACTATTGGTGATTTAACGCAGTTTTGGTTGATTACAACCATTCCGGAAGATTTTACTCCCGATCCATTTCCGTTTAATGATGTCATTGATGCAGATCTTGATACGATGTATACTACGGATATAGTATTTCGTCCACCGGATGGCACACCATCTACTTCTTTAAGTGGATTAACACCCGACACTCAAGCAGCTGTAGTACTTGGATCTAATCTTGGTGGAGGCATCGATAATTATGCGATGCGTGTTGATTATAATGGCAATGGAAGTTTTGATACGGGGTGGATTCAAAGTGGTGGAGCTATAACTGTAACAAATGGTGCAAGAATTCGAGTTAGGTTAAAATCTTCTGAGTTTACGACACAGTTTTCAAGATTGACACTTGTTATTGGTACATCTAGTGCAAGATGGGATATCTTAACTCTATCACAACCAACAAATGAACCGGAACCATTTCCAGATTTTACAGATTTAGAAGACCAACCGACAAACACATATTGTTATAGTGAGGTCATTAGATTACAGGGATTAATTTCTTCTGCTACTATTAATACCAGTGGCAATGGTGAATGGGCAATTTCATCGACAAGTAATACTTCAACAAACGCAGATGGATTTCAAGTTCTTTCTGGAGCAACTTTTACCGGTAATGATGGAACTGTGAATAATGGTGATTACTTACAGTTAAGAATTTTGAGTTCAAATAATGCTTTATTTCCAGTTACAACTAATCTTTCGATTGGAGATGCTCTCAATGGAGATACTTGGAGTGTAGAAACGGGTTCAAATCCTTCAACTAATCCCAACTCATTCTCATTTACTAATGTAGATGATGCAATTGAAGATACACTTGTGGCATCAGACGAACAACCTGCAACCGCTCTTGGAATTCAGGGATTGACAGATGGTATTCAGGTTCCAGTAGTATTAGTTTCTACTAATTCTACCAAAGTTCGTATTAAGAAAAATAATGATTCTGTTGGAGTATTCCCCACAACAGCAGGAAATGGTGATAAATTAACTCTTTATCTACAATCATCACCTTCGTTTAATACTCCCTTAAACATGCAAATTAAGGTTGGTGATCGACAGATTCCTGCATGGCAGGTAAGAACTAGTCTTGGACCAGATACTGATGCTGATTGGAGTCCACCAGCAAACAGAAATAATCAAATTCCTGAGTCTTTTGTTTCTAGTGCTCCAGTTACTGTTACTGGCATTAATAGACCAATCACAATTGAAAGTATTGCTGGATATCCTGCATTGATTTCTATTGATTTTGATTCTCCTGTAGCAGGTCCAAGAACATTTGATCCTCTTGTAAATTCTTCGTTTTATATTGTAGTACAAGCAGCATTACAACTTAATACACCAGAAACCACAACAATTAGACTTGGTACAGGAAATCCAAATCAATTTGTTTGGCAAGTTACAACATATGCTACAGTTCCACCCCCATCTACTGATGCTGCTATTTGGTACAGTAGAAAATCTAAAAAATTCGATGGGTATCCAATTGGAACAGTTCTTCCTGTTCTTAAAGAAGGTGTTGGTACTTATGGAGATTTAGATGGTGGAAATAATGATAGATATCCTGGATTTGTTCCATGTGATGGTCGTTCATTAGATAAGAATGATTACTTTGAATTGTATACTATTCTTGCTGGGGAGTATGGTGAGACTACTAATGAATTTAACGTTCCTGATTATAGAAACAGAAAATTGTGTGGCATTGGTATTGTAGATAGTACCAGAGGTAATTCGGCATTTGTGCCAATTACTCTAGGATCTTCAAAAGGTATCAATGATCCTGGTGCTGAAGGTGGATATTGGTATTTTAATAGGGTTGGTGCTCGTGGATCAAATCCTTTGGATCAAGTTCAAGGACCTCCTGGTGCTGTAGGAAGTTTAGATAGTGATTTTTTCTCTCTTGGAACAGTTAGACTAACTGGATTGGAAACACTTACTGATCAAGTTATCTTTGAAATTAATCCTAATAGTTTTGTTACAGCACAAGTTGGAGGTCTGTCTTCTATTACTGTTGCCGCTCCTACACATAATCATGCCTATATTTCTGCAGTTACAGAAGGTAATGAGGGCGAAGCTAGTATTCCATGGAATCAACCATTAGGTAGATCTATGATGGCAGGTTCACGATATGGTTCACCAAACCCAGATGAATTTGATGCTAGAGCACCTGAAAACGCAAGTTCACAGGAAAATACAGATGCAATTCGAGATGCATGGAAAAACTTTTTTGGCAGTACTCTTGGTGCTAATTTTCAGTTAGAATTGACAAGATATTATGGTTGGAAAATACAGATGCAATTCGAGATGCATGGAAAAACTTTTTTGGCAGTACTCTTGGTGCTAATTTTCAGTTAG

Genome Context

Tertiary structure

YP_010355645.1
ESMFold structure
Source ESMFold
pLDDT 63.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank