Protein

View in Explore
Genbank accession
YP_010355645.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence Phold
Probability 1,00
Protein sequence
MTYSFAPNDQPLYVSEGDYVQFRFIAPNQWNTTNTVTITIGDLTQFWLITTIPEDFTPDPFPFNDVIDADLDTMYTTDIVFRPPDGTPSTSLSGLTPDTQAAVVLGSNLGGGIDNYAMRVDYNGNGSFDTGWIQSGGAITVTNGARIRVRLKSSEFTTQFSRLTLVIGTSSARWDILTLSQPTNEPEPFPDFTDLEDQPTNTYCYSEVIRLQGLISSATINTSGNGEWAISSTSNTSTNADGFQVLSGATFTGNDGTVNNGDYLQLRILSSNNALFPVTTNLSIGDALNGDTWSVETGSNPSTNPNSFSFTNVDDAIEDTLVASDEQPATALGIQGLTDGIQVPVVLVSTNSTKVRIKKNNDSVGVFPTTAGNGDKLTLYLQSSPSFNTPLNMQIKVGDRQIPAWQVRTSLGPDTDADWSPPANRNNQIPESFVSSAPVTVTGINRPITIESIAGYPALISIDFDSPVAGPRTFDPLVNSSFYIVVQAALQLNTPETTTIRLGTGNPNQFVWQVTTYATVPPPSTDAAIWYSRKSKKFDGYPIGTVLPVLKEGVGTYGDLDGGNNDRYPGFVPCDGRSLDKNDYFELYTILAGEYGETTNEFNVPDYRNRKLCGIGIVDSTRGNSAFVPITLGSSKGINDPGAEGGYWYFNRVGARGSNPLDQVQGPPGAVGSLDSDFFSLGTVRLTGLETLTDQVIFEINPNSFVTAQVGGLSSITVAAPTHNHAYISAVTEGNEGEASIPWNQPLGRSMMAGSRYGSPNPDEFDARAPENASSQENTDAIRDAWKNFFGSTLGANFQLELTRYYGWKIQMQFEMHGKTFLAVLLVLIFS
Physico‐chemical
properties
protein length:831 AA
molecular weight: 89744,10450 Da
isoelectric point:4,32473
aromaticity:0,09988
hydropathy:-0,26534

Domains

Domains [InterPro]
IPR037053
533–608
IPR037053
IPR011083
569–610
IPR011083
SSF88874
569–642
SSF88874
YP_010355645.1
1 831
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014e
[NCBI] 		1493510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010355645.1 [NCBI]
Genbank nucleotide accession
NC_062736.1 [NCBI]
CDS location
range 40740 -> 43235
strand +
CDS
ATGACATATTCGTTTGCACCTAACGATCAACCACTTTACGTATCAGAAGGTGATTACGTACAGTTTAGGTTTATTGCACCTAATCAGTGGAACACCACCAATACTGTAACTATTACTATTGGTGATTTAACGCAGTTTTGGTTGATTACAACCATTCCGGAAGATTTTACTCCCGATCCATTTCCGTTTAATGATGTCATTGATGCAGATCTTGATACGATGTATACTACGGATATAGTATTTCGTCCACCGGATGGCACACCATCTACTTCTTTAAGTGGATTAACACCCGACACTCAAGCAGCTGTAGTACTTGGATCTAATCTTGGTGGAGGCATCGATAATTATGCGATGCGTGTTGATTATAATGGCAATGGAAGTTTTGATACGGGGTGGATTCAAAGTGGTGGAGCTATAACTGTAACAAATGGTGCAAGAATTCGAGTTAGGTTAAAATCTTCTGAGTTTACGACACAGTTTTCAAGATTGACACTTGTTATTGGTACATCTAGTGCAAGATGGGATATCTTAACTCTATCACAACCAACAAATGAACCGGAACCATTTCCAGATTTTACAGATTTAGAAGACCAACCGACAAACACATATTGTTATAGTGAGGTCATTAGATTACAGGGATTAATTTCTTCTGCTACTATTAATACCAGTGGCAATGGTGAATGGGCAATTTCATCGACAAGTAATACTTCAACAAACGCAGATGGATTTCAAGTTCTTTCTGGAGCAACTTTTACCGGTAATGATGGAACTGTGAATAATGGTGATTACTTACAGTTAAGAATTTTGAGTTCAAATAATGCTTTATTTCCAGTTACAACTAATCTTTCGATTGGAGATGCTCTCAATGGAGATACTTGGAGTGTAGAAACGGGTTCAAATCCTTCAACTAATCCCAACTCATTCTCATTTACTAATGTAGATGATGCAATTGAAGATACACTTGTGGCATCAGACGAACAACCTGCAACCGCTCTTGGAATTCAGGGATTGACAGATGGTATTCAGGTTCCAGTAGTATTAGTTTCTACTAATTCTACCAAAGTTCGTATTAAGAAAAATAATGATTCTGTTGGAGTATTCCCCACAACAGCAGGAAATGGTGATAAATTAACTCTTTATCTACAATCATCACCTTCGTTTAATACTCCCTTAAACATGCAAATTAAGGTTGGTGATCGACAGATTCCTGCATGGCAGGTAAGAACTAGTCTTGGACCAGATACTGATGCTGATTGGAGTCCACCAGCAAACAGAAATAATCAAATTCCTGAGTCTTTTGTTTCTAGTGCTCCAGTTACTGTTACTGGCATTAATAGACCAATCACAATTGAAAGTATTGCTGGATATCCTGCATTGATTTCTATTGATTTTGATTCTCCTGTAGCAGGTCCAAGAACATTTGATCCTCTTGTAAATTCTTCGTTTTATATTGTAGTACAAGCAGCATTACAACTTAATACACCAGAAACCACAACAATTAGACTTGGTACAGGAAATCCAAATCAATTTGTTTGGCAAGTTACAACATATGCTACAGTTCCACCCCCATCTACTGATGCTGCTATTTGGTACAGTAGAAAATCTAAAAAATTCGATGGGTATCCAATTGGAACAGTTCTTCCTGTTCTTAAAGAAGGTGTTGGTACTTATGGAGATTTAGATGGTGGAAATAATGATAGATATCCTGGATTTGTTCCATGTGATGGTCGTTCATTAGATAAGAATGATTACTTTGAATTGTATACTATTCTTGCTGGGGAGTATGGTGAGACTACTAATGAATTTAACGTTCCTGATTATAGAAACAGAAAATTGTGTGGCATTGGTATTGTAGATAGTACCAGAGGTAATTCGGCATTTGTGCCAATTACTCTAGGATCTTCAAAAGGTATCAATGATCCTGGTGCTGAAGGTGGATATTGGTATTTTAATAGGGTTGGTGCTCGTGGATCAAATCCTTTGGATCAAGTTCAAGGACCTCCTGGTGCTGTAGGAAGTTTAGATAGTGATTTTTTCTCTCTTGGAACAGTTAGACTAACTGGATTGGAAACACTTACTGATCAAGTTATCTTTGAAATTAATCCTAATAGTTTTGTTACAGCACAAGTTGGAGGTCTGTCTTCTATTACTGTTGCCGCTCCTACACATAATCATGCCTATATTTCTGCAGTTACAGAAGGTAATGAGGGCGAAGCTAGTATTCCATGGAATCAACCATTAGGTAGATCTATGATGGCAGGTTCACGATATGGTTCACCAAACCCAGATGAATTTGATGCTAGAGCACCTGAAAACGCAAGTTCACAGGAAAATACAGATGCAATTCGAGATGCATGGAAAAACTTTTTTGGCAGTACTCTTGGTGCTAATTTTCAGTTAGAATTGACAAGATATTATGGTTGGAAAATACAGATGCAATTCGAGATGCATGGAAAAACTTTTTTGGCAGTACTCTTGGTGCTAATTTTCAGTTAG

Tertiary structure

PDB ID
4c27198261bc4d04b5f108fe41eb81c05d5ef495ff8d6aaabe6121227fcdd174
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6344
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank