Protein

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UniProt accession
R4ICC1 [UniProt]
Protein name
Short tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSELIKVFKYDDKGIFERDDLIILKKGEKIPDGYTLIEPPVPAINPVFNTKKQKWSSGEEASIPEPQHLTELEKLTQDYADLMLYVAEVEQKTEQTQQDNANLLLSLAEAGVL
Physico‐chemical
properties
protein length:113 AA
molecular weight: 12805,41900 Da
isoelectric point:4,52554
aromaticity:0,07080
hydropathy:-0,45044

Domains

Domains [InterPro]
Coil
72–92
Coil
R4ICC1
1 113
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-030-2
[NCBI] 		1173743 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes serotype 4b str. F2365
[NCBI] 		265669 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFN39957.1 [NCBI]
Genbank nucleotide accession
JX120799 [NCBI]
CDS location
range 15003 -> 15344
strand +
CDS
ATGAGCGAGTTAATAAAAGTTTTTAAATATGACGACAAAGGCATTTTTGAGCGTGACGACTTAATTATTTTAAAAAAAGGGGAGAAGATTCCGGATGGCTATACACTAATTGAACCACCAGTACCAGCAATTAATCCGGTTTTTAATACGAAAAAGCAAAAATGGAGTTCTGGTGAAGAAGCAAGCATTCCGGAACCGCAACATTTAACAGAACTTGAAAAATTAACTCAAGATTATGCGGACTTAATGCTATATGTAGCGGAAGTTGAGCAGAAGACAGAACAAACGCAACAAGATAATGCAAACTTACTTTTATCTCTCGCGGAGGCAGGTGTTTTGTAA

Tertiary structure

PDB ID
bffcd9f464a22e0b5f3535677bef84769d6ed75d6bd5382b97cd31b7e3834e9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8099
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50