Protein

View in Explore
Genbank accession
VOH54410.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MSNLNDFFGSSGSEGGGAEVKRLDDLVDVSVASPTNGQTLVFDNTGWVNRKLSYNDLSNLPSISNTLSGLDDVDTAGTIAGYVLQFNGIKWVGMPASSSISLDDLSNVAITAPSINQTLLFNGSTWYNGSVDFNNLINTPVIPTQLGDLSDVSVSASTQEGSVLVFRTGQWIGSVINYNDLSNTPTIPQNDSFTFLGLSDTNDIPEANGFLKWNNLSTEIEYVTSIPSSAITGLANVATTGLLSNLVDVNVSGVSNGQVLTYNSSSSTWVPTTPSTGGGTSDPTAIFSTDGNTYINTEELVDELVLKTGPGSGNVNVILGGGGKIVVEGQSPEIISETSLKLTGSNLYLNELSWPTTDGTSGQVLATDGNGNLSFITVSAGGTTILINWRGEWEETSYNINDAVSYAGSSYICVAEVAGGDISIPPSSTNLNWNILALKGEDGSFFTYKGTYDSNTEYVDKDVVYYNGSSYVVLDGQGPITGITPTDQSKWGILALAGSGGTGSGFTYKNEYNNSETYQDQDVVSYGGSSYIVSPGNGPVTGILPTDSSIWGIIALKGQDGSGTGNQSLEDLTDVSSATPTSGNVLVANGSSWSSSKLSYSQLQGLPTLSVVATSGSYNDLLDKPSNTGTFIGLSDTDTPSLPNGFLKWNAQGTSISYVQSIPSESISGLATVATTGDYSDLTNTPNIPVVLDDLTDVNLVTPPVTGQALVYNGTYWLAGNAGSSSSTLASLTDVNLTTPTNNQVLSYDNTQNLWINTQIDYDDILNTPSIPVNNSFSLVGLNDTDNSAIPNAFLKWNSTGNSVEYVQSISASSITGLSTVATTGDYNDLTNLPSIPENISDLNDVDTTSTAPTDGQVLIYSAALGKWIPGDQSGTSPVPGGFPGEWLKINYTPGNLIGTIECSPNISYTIVDNVANNNLTLDLVFANRPYPPAGWMWYGYLVTQGRYVLKMQDTTSHPHTLELTTTENPFGTGTGKLSGFQCRVSTTGAQSYGPLQPTHAYVIFGW
Physico‐chemical
properties
protein length:1007 AA
molecular weight: 105897,67020 Da
isoelectric point:4,05003
aromaticity:0,08640
hydropathy:-0,14945

Domains

View on InterPro
Domain architecture
VOH54410.1
1 1007 aa
STR 388–493 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
VOH54410.1
1 1007 aa
Domain Start End Length (AA) Confidence
N-terminal 1 880 880 0,9975
Central domain 881 996 117 0,0693
C-terminal 997 1007 10 0,9834
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas phage vB_PaeM_MIJ3 [NCBI] · taxon 2567864
No lineage information
Host No host information

Coding sequence (CDS)

Genbank protein accession
VOH54410.1 [NCBI]
Genbank nucleotide accession
LR588166 [NCBI]
CDS location
range 110889 -> 113912
strand +
CDS
ATGTCTAATTTAAATGATTTTTTTGGATCAAGTGGATCAGAAGGCGGGGGAGCCGAAGTTAAAAGACTAGACGACTTAGTAGACGTTTCTGTAGCTAGTCCAACTAACGGTCAAACCCTTGTTTTTGACAACACAGGCTGGGTAAACAGAAAACTTAGCTACAATGATTTATCTAATCTTCCGTCTATATCAAACACATTAAGTGGATTAGATGATGTAGACACTGCCGGTACTATAGCAGGATATGTATTACAATTTAACGGAATAAAATGGGTAGGTATGCCTGCCAGTAGTTCCATTTCGTTAGACGATTTATCTAATGTTGCTATTACAGCACCCTCAATAAACCAAACACTGCTATTTAATGGATCAACATGGTATAACGGATCTGTAGATTTTAATAATTTAATAAACACACCCGTTATTCCTACACAGTTAGGCGATTTGTCAGATGTTTCTGTCAGTGCTTCTACTCAAGAAGGAAGTGTACTAGTTTTTAGAACAGGACAATGGATCGGTTCTGTAATAAATTACAACGATTTGTCAAATACTCCTACTATACCGCAAAACGATTCATTTACATTCTTAGGTTTATCCGATACCAACGATATACCGGAAGCAAATGGGTTTTTAAAATGGAATAATTTAAGTACAGAAATAGAATATGTTACTTCAATTCCTTCGTCTGCTATAACAGGATTAGCCAATGTTGCAACAACCGGTTTATTATCCAATTTAGTAGATGTGAATGTCAGTGGTGTATCTAATGGCCAGGTTCTAACATATAATTCCTCTTCTAGCACATGGGTTCCTACTACGCCATCGACCGGCGGCGGAACAAGTGATCCTACTGCTATTTTTAGTACAGACGGTAATACGTATATTAATACCGAAGAATTAGTAGACGAGCTAGTTTTAAAAACCGGACCTGGATCCGGAAATGTAAATGTCATTCTTGGTGGCGGCGGCAAGATTGTCGTCGAAGGTCAATCTCCGGAAATAATATCGGAAACTAGTTTAAAATTAACAGGTAGCAATTTATATTTAAATGAACTATCTTGGCCTACGACTGACGGAACGAGCGGTCAAGTTTTAGCTACAGACGGAAATGGAAATCTCTCATTTATAACAGTATCGGCTGGCGGAACTACTATACTCATAAACTGGCGTGGCGAATGGGAAGAAACTAGTTATAATATAAACGACGCAGTAAGTTATGCTGGTTCTAGTTATATATGTGTTGCTGAAGTAGCTGGCGGCGATATTTCTATTCCGCCTAGCAGTACAAACTTAAATTGGAATATACTAGCACTAAAAGGTGAAGACGGATCATTCTTTACTTATAAAGGAACTTATGATTCTAATACTGAATATGTAGATAAAGATGTAGTTTATTATAACGGTTCATCTTATGTAGTGTTAGACGGTCAAGGACCTATTACAGGAATCACCCCTACTGACCAATCTAAATGGGGTATATTAGCGTTAGCTGGTTCTGGAGGAACAGGCAGTGGTTTTACTTACAAAAATGAATATAATAATTCGGAAACTTATCAAGACCAAGACGTTGTTAGTTATGGAGGATCTTCATACATTGTTAGTCCTGGCAACGGTCCTGTTACTGGTATTTTGCCTACCGATTCTTCTATTTGGGGTATTATTGCACTCAAGGGTCAAGACGGGTCTGGAACAGGTAACCAGTCGCTTGAAGATTTAACTGATGTATCTAGTGCCACTCCTACTTCGGGGAATGTGTTAGTAGCTAACGGGTCATCATGGTCTTCTTCTAAGTTATCATATAGTCAACTCCAAGGTCTACCCACTTTATCTGTAGTTGCTACTTCTGGTAGTTATAATGACTTATTAGATAAACCTTCTAATACAGGAACATTTATTGGATTATCAGATACTGATACTCCTTCCCTACCGAATGGATTTTTAAAATGGAATGCACAAGGAACATCTATATCTTATGTACAATCAATACCTTCAGAATCTATTTCTGGTTTGGCTACTGTTGCTACTACCGGTGATTATAGCGATTTAACTAATACACCTAACATACCAGTTGTGCTAGACGACTTGACCGATGTGAATTTAGTTACACCTCCCGTAACAGGGCAAGCTTTAGTATACAACGGTACGTATTGGTTGGCAGGCAATGCCGGAAGCAGTTCTAGCACACTAGCATCATTAACTGACGTTAACTTAACTACTCCTACCAACAATCAAGTATTATCGTATGACAATACACAAAATTTGTGGATTAATACACAAATCGATTATGATGATATTTTAAATACACCTAGTATACCCGTAAATAATAGCTTTAGCTTGGTTGGGTTGAACGACACGGATAATTCTGCTATTCCGAACGCATTCTTAAAATGGAACTCAACTGGGAATTCAGTAGAATACGTTCAGTCTATTTCTGCTAGTAGTATAACAGGATTATCTACTGTTGCTACAACTGGAGACTACAACGACTTAACTAATTTACCTTCTATTCCAGAAAATATAAGTGATTTAAATGATGTAGATACTACATCTACTGCACCTACTGACGGTCAAGTACTCATATATAGTGCAGCACTAGGAAAGTGGATTCCTGGAGATCAAAGCGGTACTAGTCCAGTTCCAGGCGGCTTCCCCGGTGAATGGTTAAAAATCAATTATACCCCTGGCAATTTAATAGGTACAATCGAGTGTTCGCCTAATATATCATACACTATAGTAGATAATGTTGCAAATAATAATCTTACTTTAGATTTAGTATTTGCAAATAGACCATACCCGCCTGCCGGATGGATGTGGTATGGTTACTTAGTAACACAAGGCAGATATGTATTAAAAATGCAAGATACTACTAGTCATCCGCATACGTTAGAGCTTACAACTACTGAAAATCCATTTGGGACAGGAACTGGAAAATTATCAGGATTCCAGTGCAGGGTATCAACTACTGGAGCCCAAAGTTATGGTCCTCTTCAGCCTACGCATGCATATGTGATATTTGGGTGGTAA

Genome Context

Tertiary structure

VOH54410.1
ColabFold structure
Source ColabFold
pLDDT 27.9
Oligomeric state monomer
Download structure